RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FAM216BQ8N7L0 139 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 OR51A2Q8NGJ7 313 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 FCGR1BQ92637 280 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 DMRTB1Q96MA1 342 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 GAFA1Q96PS6 74 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 NUDT16L1Q9BRJ7 211 aaKnown RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 TMED9Q9BVK6 235 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SEBOXQ9HB31 216 aaPredicted RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SLC25A10Q9UBX3 287 aaPredicted RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 ZNF222Q9UK12 451 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.42
RNF4-210ENST00000508235 KIR2DS1A0A191URI9 304 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 KDM4BO94953 1096 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 AMY2BP19961 511 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 ZNF93P35789 620 aaPredicted RBP12.45□□□□□ -0.42
RNF4-210ENST00000508235 ZP1P60852 638 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 PAX2Q02962 417 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
RNF4-210ENST00000508235 ACSM3Q53FZ2 586 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 SPIN3Q5JUX0 258 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 LIPKQ5VXJ0 399 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 ASPHD2Q6ICH7 369 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 CDH26Q8IXH8 852 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 NKAIN3Q8N8D7 197 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 PXT1Q8NFP0 134 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 OR5D18Q8NGL1 313 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 TMPRSS13Q9BYE2 586 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
RNF4-210ENST00000508235 ZANQ9Y493 2812 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 MEGF11A6BM72 1044 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 ANGPTL7O43827 346 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 INMTO95050 263 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 CHRM2P08172 466 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 HOXB4P17483 251 aaPredicted RBP12.44□□□□□ -0.42
RNF4-210ENST00000508235 BCL3P20749 454 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 PAX8Q06710 450 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 KCTD21Q4G0X4 260 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 ZNF773Q6PK81 442 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 PHC2Q8IXK0 858 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 CD177Q8N6Q3 437 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 TMEM185AQ8NFB2 350 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 NANPQ8TBE9 248 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 TNFAIP8L1Q8WVP5 186 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 PHYHIPQ92561 330 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 DACT3Q96B18 629 aaPredicted RBP12.44□□□□□ -0.42
RNF4-210ENST00000508235 S100A13Q99584 98 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 HMG20AQ9NP66 347 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 NOX4Q9NPH5 578 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 PCDHB16Q9NRJ7 776 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 RBFOX1Q9NWB1 397 aaKnown RBP12.44□□□□□ -0.42
RNF4-210ENST00000508235 RPUSD1Q9UJJ7 312 aaKnown RBP12.44□□□□□ -0.42
RNF4-210ENST00000508235 MAB21L2Q9Y586 359 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 WNK2Q9Y3S1 2297 aa12.44□□□□□ -0.42
RNF4-210ENST00000508235 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 IGKV1-12A0A0C4DH73 117 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 A0A1B0GW55 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 A0A1W2PPK0 400 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 C22orf46C9J442 243 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 F8VVB4 439 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 F8VWA3 439 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 GABRPO00591 440 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 SC5DO75845 299 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 IFNA2P01563 188 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 IGKV1D-12P01611 117 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L2P0CJ85 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L3P0CJ86 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L4P0CJ87 422 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L5P0CJ88 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L6P0CJ89 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L7P0CJ90 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 NDUFB7P17568 137 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 PRKACAP17612 351 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 GABRA5P31644 462 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 PTGFRP43088 359 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 NPBWR2P48146 333 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 MTNR1BP49286 362 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 CAPZA1P52907 286 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 ZNF146Q15072 292 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 RSU1Q15404 277 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DGUOKQ16854 277 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4L9Q6RFH8 374 aaPredicted RBP12.43□□□□□ -0.42
RNF4-210ENST00000508235 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 C1QL2Q7Z5L3 287 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 CEACAM19Q7Z692 300 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms