RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF581Q9P0T4 197 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 DNAJB11Q9UBS4 358 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 OR14J1Q9UGF5 321 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 USF3Q68DE3 2245 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 TMEM178BH3BS89 294 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.28■□□□□ 0.2
USP39-218ENST00000493829 SSX4O60224 188 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ZNF780AO75290 641 aaPredicted RBP16.28■□□□□ 0.2
USP39-218ENST00000493829 F12P00748 615 aaPredicted RBP16.28■□□□□ 0.2
USP39-218ENST00000493829 GABRR1P24046 479 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ATP5J2P56134 94 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 FGF12P61328 243 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 GPR176Q14439 515 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 UBE2NLQ5JXB2 153 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ACP7Q6ZNF0 438 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 BIVMQ86UB2 503 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 Q8IYB0 196 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 MRI1Q9BV20 369 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ATG5Q9H1Y0 275 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 MIXL1Q9H2W2 232 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 HMG20AQ9NP66 347 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ST3GAL6Q9Y274 331 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 NPTNQ9Y639 398 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 ABCA12Q86UK0 2595 aa16.28■□□□□ 0.2
USP39-218ENST00000493829 A0A075B6Q4 140 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 FAM25AB3EWG3 89 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 FAM25CB3EWG5 89 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 FAM25GB3EWG6 89 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 NOS1APO75052 506 aaPredicted RBP16.27■□□□□ 0.2
USP39-218ENST00000493829 RP2O75695 350 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 CLPXO76031 633 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 PTH2RP49190 550 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 CAPZA1P52907 286 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 RBM11P57052 281 aaKnown RBP16.27■□□□□ 0.2
USP39-218ENST00000493829 RPS27AP62979 156 aaKnown RBP16.27■□□□□ 0.2
USP39-218ENST00000493829 SMIM21Q3B7S5 101 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 AVPI1Q5T686 147 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 ZNF525Q8N782 197 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 OR51T1Q8NGJ9 327 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 CYYR1Q96J86 154 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 HES4Q9HCC6 221 aa16.27■□□□□ 0.2
USP39-218ENST00000493829 A0A0A6YYD4 124 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 GEMIN2O14893 280 aaKnown RBP16.27■□□□□ 0.19
USP39-218ENST00000493829 LHBP01229 141 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 ELK1P19419 428 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 ART1P52961 327 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 SCN1BQ07699 218 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 TAF9Q16594 264 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 ELP2Q6IA86 826 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 RTN4RL2Q86UN3 420 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 IZUMO1Q8IYV9 350 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 CMTM4Q8IZR5 234 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 C1orf87Q8N0U7 546 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 LPAR5Q9H1C0 372 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 MMP27Q9H306 513 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 RAB22AQ9UL26 194 aa16.27■□□□□ 0.19
USP39-218ENST00000493829 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 TMEM127O75204 238 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 CFHR2P36980 270 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 VEGFCP49767 419 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 SCAND1P57086 179 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 IKZF1Q13422 519 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 ZNF181Q2M3W8 571 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 MOGAT2Q3SYC2 334 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 Q96M66 194 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 DLL4Q9NR61 685 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 PCDHB16Q9NRJ7 776 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 NLKQ9UBE8 527 aa16.26■□□□□ 0.19
USP39-218ENST00000493829 POLQO75417 2590 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 ISPDA4D126 451 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 OOEPA6NGQ2 149 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 PPIHO43447 177 aaKnown RBP16.25■□□□□ 0.19
USP39-218ENST00000493829 RAB6AP20340 208 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 RANBP1P43487 201 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 FIP1L1Q6UN15 594 aaKnown RBP16.25■□□□□ 0.19
USP39-218ENST00000493829 URM1Q9BTM9 101 aaKnown RBP16.25■□□□□ 0.19
USP39-218ENST00000493829 ZNF701Q9NV72 531 aaPredicted RBP16.25■□□□□ 0.19
USP39-218ENST00000493829 FBLN5Q9UBX5 448 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 APCP25054 2843 aa16.25■□□□□ 0.19
USP39-218ENST00000493829 PPIAL4EA0A075B759 164 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 PPIAL4DF5H284 164 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 HSPB6O14558 160 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 OR7C1O76099 320 aaPredicted RBP16.24■□□□□ 0.19
USP39-218ENST00000493829 GYPAP02724 150 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 ACAA1P09110 424 aaPredicted RBP16.24■□□□□ 0.19
USP39-218ENST00000493829 PPIAL4FP0DN26 164 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 DNASE1P24855 282 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 S100A5P33763 92 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 DYNC1I2Q13409 638 aaKnown RBP16.24■□□□□ 0.19
USP39-218ENST00000493829 ZMYND11Q15326 602 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 NKAPLQ5M9Q1 402 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 FAM90A1Q86YD7 464 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 RASL12Q9NYN1 266 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 WIPI2Q9Y4P8 454 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 PPIAL4AQ9Y536 164 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 A3GALT2U3KPV4 340 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 NBPF19A0A087WUL8 3843 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 RFPL4AA6NLU0 287 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 OR2AT4A6NND4 320 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 RFPL4AL1F8VTS6 287 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms