RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PLCXD3Q63HM9 321 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 GJC3Q8NFK1 279 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 OR51H1Q8NH63 302 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 LRFN1Q9P244 771 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 DKKL1Q9UK85 242 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 ST3GAL6Q9Y274 331 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 LOC390937A0A1W2PQ73 354 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 DBX1A6NMT0 343 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 MASP2O00187 686 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 RBMXL2O75526 392 aaKnown RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 DEDDO75618 318 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 FCGR3AP08637 254 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 FABP4P15090 132 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 NKX2-1P43699 371 aaPredicted RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 SMAD4Q13485 552 aaKnown RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 HMGN3Q15651 99 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 LGI3Q8N145 548 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 PLPP5Q8NEB5 264 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 PLEKHA2Q9HB19 425 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
VPS52-218ENST00000482399 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 E9PLN8 166 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 PPP1R2P9O14990 202 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 SGCZQ96LD1 299 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 ZNF385AQ96PM9 386 aaKnown RBP11.13□□□□□ -0.63
VPS52-218ENST00000482399 NIPSNAP3BQ9BS92 247 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 VPS13AQ96RL7 3174 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 SCRG1O75711 98 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 B4GALT1P15291 398 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 MSR1P21757 451 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 SNCAP37840 140 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 MALLQ13021 153 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 HIST2H3PS2Q5TEC6 136 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 OR5L2Q8NGL0 311 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 OR14L1PQ8NHC6 308 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
VPS52-218ENST00000482399 FASLGP48023 281 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 QRFPP83859 136 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 CPNE4Q96A23 557 aaPredicted RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 A0A1W2PQD3 144 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 ZFAND5O76080 213 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 GRB2P62993 217 aaKnown RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 CCL20P78556 96 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 OR2B11Q5JQS5 317 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 SSX9Q7RTT3 188 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 CRLF2Q9HC73 371 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 NKX2-6A6NCS4 301 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 EFNA2O43921 213 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
VPS52-218ENST00000482399 OR2T2Q6IF00 324 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 ZNF774Q6NX45 483 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 THNSL2Q86YJ6 484 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 CFHR5Q9BXR6 569 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 R4GN57 208 aa11.12□□□□□ -0.63
VPS52-218ENST00000482399 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 IGHV1OR21-1A0A087WYE8 117 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 H3BQ15 152 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 DHRS3O75911 302 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 CELA2AP08217 269 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 SRYQ05066 204 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 SPEM2Q0P670 501 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 IZUMO4Q1ZYL8 232 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 SNAI3Q3KNW1 292 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 SLC25A26Q70HW3 274 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 SLC35G3Q8N808 338 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 NAT6Q93015 286 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 MR1Q95460 341 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 GPR61Q9BZJ8 451 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 TRBV6-7A0A0A0MS04 114 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 MSTNO14793 375 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 PHOX2AO14813 284 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 EIF1BO60739 113 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 SRSF10O75494 262 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 CD5P06127 495 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms