RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 BEX5Q5H9J7 111 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 TOR2AQ5JU69 321 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 MRPL21Q7Z2W9 205 aaKnown RBP11.21□□□□□ -0.62
SEC13-216ENST00000479868 FDCSPQ8NFU4 85 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 HPSE2Q8WWQ2 592 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.62
SEC13-216ENST00000479868 WDR13Q9H1Z4 485 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 LIME1Q9H400 295 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 POM121CA8CG34 1229 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 ZNF205O95201 554 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 KNG1P01042 644 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 RRASP10301 218 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 GPM6AP51674 278 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 MALLQ13021 153 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 COQ8AQ8NI60 647 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 SCARB1Q8WTV0 552 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 WBP1Q96G27 269 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 MBD2Q9UBB5 411 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 EDARQ9UNE0 448 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 ZNF292O60281 2723 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 A0A0D9SG52 128 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 KCNAB3O43448 404 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 WISP2O76076 250 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 CRHP06850 196 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 NMBP08949 121 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 OR5H8P0DN80 308 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 PGAM2P15259 253 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 DTYMKP23919 212 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 ZNF345Q14585 488 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
SEC13-216ENST00000479868 FBXW9Q5XUX1 488 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 Q6ZPA2 131 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 RFPL4BQ6ZWI9 263 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 MARS2Q96GW9 593 aaKnown RBP11.2□□□□□ -0.62
SEC13-216ENST00000479868 CHMP1AQ9HD42 196 aaPredicted RBP11.2□□□□□ -0.62
SEC13-216ENST00000479868 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
SEC13-216ENST00000479868 PTPRBP23467 1997 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 TUBAL3A6NHL2 446 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 RLN2P04090 185 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 CALCRP30988 508 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 PTGER4P35408 488 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 WNT5AP41221 380 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 HAAOP46952 286 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 PLP2Q04941 152 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 CLN3Q13286 438 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
SEC13-216ENST00000479868 OR51B6Q9H340 312 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 ZMAT5Q9UDW3 170 aaKnown RBP11.19□□□□□ -0.62
SEC13-216ENST00000479868 F8VVB4 439 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 F8VWA3 439 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 PDCD6O75340 191 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 OR7C1O76099 320 aaPredicted RBP11.19□□□□□ -0.62
SEC13-216ENST00000479868 OR2F2O95006 317 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 BCL3P20749 454 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 PSMB6P28072 239 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 OR2F1Q13607 317 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 CEACAM21Q3KPI0 293 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 THAP6Q8TBB0 222 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
SEC13-216ENST00000479868 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 CXorf58Q96LI9 332 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 DMRTA2Q96SC8 542 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 NMES1Q9C002 83 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 RAB18Q9NP72 206 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 C14orf166Q9Y224 244 aaKnown RBP11.19□□□□□ -0.62
SEC13-216ENST00000479868 LAMA5O15230 3695 aa11.19□□□□□ -0.62
SEC13-216ENST00000479868 ARID1AO14497 2285 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 A0A0B4J2A0 478 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 LILRA1O75019 489 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 CST4P01036 141 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 FOSL1P15407 271 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 ACOT7LQ6ZUV0 252 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 OR10C1Q96KK4 312 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 PCDHB16Q9NRJ7 776 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 DECR2Q9NUI1 292 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 SHPKQ9UHJ6 478 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 ESPL1Q14674 2120 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 I3L521 148 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 SPINK2P20155 84 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 APLNRP35414 380 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 AANATQ16613 207 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 SLC22A25Q6T423 547 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 MDP1Q86V88 176 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 FAM219AQ8IW50 185 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 Q8NFD4 153 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 ST8SIA2Q92186 375 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 ZNF75AQ96N20 296 aa11.18□□□□□ -0.62
SEC13-216ENST00000479868 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms