RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 AMY1AP04745 511 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 AMY2AP04746 511 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 CHATP28329 748 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 CEACAM3P40198 252 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 OR3A4PP47883 348 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 RAB25P57735 213 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 ERVK11-1P61568 191 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 BDH1Q02338 343 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 IL24Q13007 206 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
DDX56-210ENST00000479440 C9orf66Q5T8R8 295 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 ASRGL1Q7L266 308 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 RTN4RL2Q86UN3 420 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 CMTM5Q96DZ9 223 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 PRR25Q96S07 402 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 PKIBQ9C010 78 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 GPR173Q9NS66 373 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 LCE6AA0A183 80 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 LEUTXA8MZ59 168 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 PRR23D1E9PI22 279 aaPredicted RBP12.75□□□□□ -0.37
DDX56-210ENST00000479440 PRODHO43272 600 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 PRR23D2P0DMB1 279 aaPredicted RBP12.75□□□□□ -0.37
DDX56-210ENST00000479440 PEX2P28328 305 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 MNDAP41218 407 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 SLC35B1P78383 322 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 CCDC144NLQ6NUI1 221 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 DEGS2Q6QHC5 323 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 ABHD12Q8N2K0 398 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 CREB3L1Q96BA8 519 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 CEP19Q96LK0 163 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 MROQ9BYG7 248 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 TAS2R1Q9NYW7 299 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 SACSQ9NZJ4 4579 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 DNAJB9Q9UBS3 223 aa12.75□□□□□ -0.37
DDX56-210ENST00000479440 H3BN98 237 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 LYL1P12980 280 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 HSD17B1P14061 328 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 ALOX5APP20292 161 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 LUMP51884 338 aaPredicted RBP12.74□□□□□ -0.37
DDX56-210ENST00000479440 ESRRGP62508 458 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 GRK1Q15835 563 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 SLX4IPQ5VYV7 408 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 TMEM42Q69YG0 159 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 COMMD1Q8N668 190 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 IQCF1Q8N6M8 205 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 TEAD3Q99594 435 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
DDX56-210ENST00000479440 NUFIP1Q9UHK0 495 aaKnown RBP12.74□□□□□ -0.37
DDX56-210ENST00000479440 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
DDX56-210ENST00000479440 GABRR1P24046 479 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 ECI1P42126 302 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 RPS7P62081 194 aaKnown RBP12.73□□□□□ -0.37
DDX56-210ENST00000479440 MICAQ29983 383 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 HDXQ7Z353 690 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 ZNF695Q8IW36 515 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 RCHY1Q96PM5 261 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 GLS2Q9UI32 602 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
DDX56-210ENST00000479440 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 OOSP1A8MZH6 123 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 CCL24O00175 119 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 ZNF254O75437 659 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 HAND1O96004 215 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
DDX56-210ENST00000479440 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 TPTE2P1Q5T6R2 138 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 PRAMEF5Q5TYX0 476 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 ANGPTL5Q86XS5 388 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 ENTHD1Q8IYW4 607 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 REEP1Q9H902 201 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 GTF2A1LQ9UNN4 478 aa12.72□□□□□ -0.37
DDX56-210ENST00000479440 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 DHRS7CA6NNS2 312 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 TOR1AO14656 332 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 MGST3O14880 152 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 E2F6O75461 281 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 MMP23AO75900 390 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 IGLV1-47P01700 117 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 TTRP02766 147 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 CD34P28906 385 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 PRDX6P30041 224 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 MAGEA2P43356 314 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 P2RX3P56373 397 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms