RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KLHDC2Q9Y2U9 406 aa4.07□□□□□ -1.76
SNRNP40-204ENST00000474025 DSCAML1Q8TD84 2053 aa4.07□□□□□ -1.76
SNRNP40-204ENST00000474025 PSMB11A5LHX3 300 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 FAM183AA6NL82 134 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 RIIAD1A6NNX1 92 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 H3BUI4 141 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SELENOFO60613 162 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 RAMP3O60896 148 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 DNAJC8O75937 253 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 OR2F2O95006 317 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SOX14O95416 240 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 GASTP01350 101 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 IFNGP01579 166 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 IGLV3-1P01715 115 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 FABP3P05413 133 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 LYL1P12980 280 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ATP6V1B1P15313 513 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 MPZP25189 248 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 HTR1DP28221 377 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SLC6A1P30531 599 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 HAAOP46952 286 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 LUMP51884 338 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 HMGA2P52926 109 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 EDDM3BP56851 147 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 PSME3P61289 254 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ERVK11-1P61568 191 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 MEF2CQ06413 473 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 IL18R1Q13478 541 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 FDX2Q6P4F2 183 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 UNQ9370/PRO34162Q6UXP9 181 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 MOB3CQ70IA8 216 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 PIGWQ7Z7B1 504 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF329Q86UD4 541 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF573Q86YE8 665 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 BATF2Q8N1L9 274 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 RNF148Q8N7C7 305 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF676Q8N7Q3 588 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ASCC1Q8N9N2 400 aaKnown RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 THEM6Q8WUY1 208 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 CAPSLQ8WWF8 208 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ITFG2Q969R8 447 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 MCUR1Q96AQ8 359 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 RBM14Q96PK6 669 aaKnown RBP4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 PRR25Q96S07 402 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ASCL2Q99929 193 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 CLEC7AQ9BXN2 247 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 TMEM133Q9H2Q1 129 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 NIPAL2Q9H841 368 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 EFCAB1Q9HAE3 211 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SPAG4Q9NPE6 437 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 IL1RAPQ9NPH3 570 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 ARMC1Q9NVT9 282 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 FAM206AQ9NX38 181 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 VNN3Q9NY84 501 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 TAS2R1Q9NYW7 299 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 BAIAP2Q9UQB8 552 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SLC22A13Q9Y226 551 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 POLDIP2Q9Y2S7 368 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 LINC00312Q9Y6C7 94 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 SESN1Q9Y6P5 492 aa4.06□□□□□ -1.76
SNRNP40-204ENST00000474025 hADV38S2A0JD32 116 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 TMEM82A0PJX8 343 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 PQLC2LA1A4F0 135 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 ACOD1A6NK06 481 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 NUDT19A8MXV4 375 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 F8VVB4 439 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 F8VWA3 439 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 M0QZK8 103 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 TNFRSF11BO00300 401 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 GMNNO75496 209 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 MMP23AO75900 390 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 KRT36O76013 467 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 HTR3BO95264 441 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 NRASP01111 189 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 IGLV1-47P01700 117 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 SNRNP70P08621 437 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 CHATP28329 748 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 MYCNOSP40205 109 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 OR3A4PP47883 348 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 BDH1Q02338 343 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 RIPPLY1Q0D2K3 151 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 EDDM3AQ14507 147 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 SNAPC1Q16533 368 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 C21orf62-AS1Q17RA5 79 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 C9orf152Q5JTZ5 239 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 SAMD4BQ5PRF9 694 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF684Q5T5D7 378 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 LCN1P1Q5VSP4 162 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 TMEM42Q69YG0 159 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 PLBD1Q6P4A8 553 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 BAIAP2L2Q6UXY1 529 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 ZBTB49Q6ZSB9 765 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 GDPD3Q7L5L3 318 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 COMMD2Q86X83 199 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 OR8H2Q8N162 312 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 IQCF1Q8N6M8 205 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 TPRX1Q8N7U7 411 aa4.05□□□□□ -1.76
SNRNP40-204ENST00000474025 AQP11Q8NBQ7 271 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms