RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 CHST6Q9GZX3 395 aa14.37□□□□□ -0.11
CHCHD3-203ENST00000448878 NUDT19A8MXV4 375 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 DLGAP1O14490 977 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 NHLRC4P0CG21 123 aaPredicted RBP14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 GABRR1P24046 479 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 APOFQ13790 326 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 SLC35D3Q5M8T2 416 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 DEGS2Q6QHC5 323 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 GIPC3Q8TF64 312 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 SNX22Q96L94 193 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 YIPF3Q9GZM5 350 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 FAM107BQ9H098 131 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 PAPOLBQ9NRJ5 636 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 DPM3Q9P2X0 92 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 PCDHGB5Q9Y5G0 923 aa14.36□□□□□ -0.11
CHCHD3-203ENST00000448878 PSMB11A5LHX3 300 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 FAM172BPA6NC97 362 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 ZNF737O75373 536 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 TTRP02766 147 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 HMGN1P05114 100 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 ATP6V1B2P21281 511 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 PEX2P28328 305 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 MAGEA2P43356 314 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 DGCR2P98153 550 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 MFGE8Q08431 387 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 GRK1Q15835 563 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 C16orf89Q6UX73 402 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 CD300LDQ6UXZ3 194 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 ZNF329Q86UD4 541 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 EGFL6Q8IUX8 553 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 ABHD12Q8N2K0 398 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 SLAMF9Q96A28 289 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 CEP19Q96LK0 163 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 RBM14Q96PK6 669 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 ZMAT5Q9UDW3 170 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 NUFIP1Q9UHK0 495 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 SLC7A11Q9UPY5 501 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 LINC00312Q9Y6C7 94 aa14.35□□□□□ -0.11
CHCHD3-203ENST00000448878 LOC110117498-PIK3R3F6TDL0 507 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 F8VVB4 439 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 F8VWA3 439 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 ZNF254O75437 659 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 OR2F2O95006 317 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 IGLV3-1P01715 115 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 THBS3P49746 956 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 RAB25P57735 213 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 ERVK11-1P61568 191 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 IL24Q13007 206 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 FAM98BQ52LJ0 330 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 SLX4IPQ5VYV7 408 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 ZNF679Q8IYX0 411 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 OSR2Q8N2R0 312 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 OR4P4Q8NGL7 312 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 PKIBQ9C010 78 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 ACTR3BQ9P1U1 418 aa14.34□□□□□ -0.11
CHCHD3-203ENST00000448878 TMEM82A0PJX8 343 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 H3BSH0 61 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 MMP23AO75900 390 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 IGHA1P01876 353 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 MPZP25189 248 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 SNAPC1Q16533 368 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 KLHL22Q53GT1 634 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 BCL2L15Q5TBC7 163 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 ETV3LQ6ZN32 361 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 C8orf86Q6ZUL3 223 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 ZNF596Q8TC21 504 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 EMG1Q92979 244 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 TEX12Q9BXU0 123 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 CADM1Q9BY67 442 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 MAGIXQ9H6Y5 334 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 MTCH1Q9NZJ7 389 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 TMEM14AQ9Y6G1 99 aa14.33□□□□□ -0.12
CHCHD3-203ENST00000448878 LEUTXA8MZ59 168 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 GNGT2O14610 69 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 TOR1AO14656 332 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 HAND1O96004 215 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 DUSP1P28562 367 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 SNU13P55769 128 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 RBM39Q14498 530 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 ODF4Q2M2E3 257 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 PRAMEF5Q5TYX0 476 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 TMEM42Q69YG0 159 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 OR52W1Q6IF63 320 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 BAIAP2L2Q6UXY1 529 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 C18orf65Q6ZTR6 163 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 OR52N4Q8NGI2 321 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 OR14K1Q8NGZ2 314 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 ASB17Q8WXJ9 295 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 ASCL2Q99929 193 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 APOL4Q9BPW4 351 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 ZNF556Q9HAH1 456 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 PLEKHA1Q9HB21 404 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 NDE1Q9NXR1 346 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 TAGLN3Q9UI15 199 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 GLS2Q9UI32 602 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 OR52A1Q9UKL2 312 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 COPS3Q9UNS2 423 aa14.32□□□□□ -0.12
CHCHD3-203ENST00000448878 V9GYS6 101 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms