RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 LHFPL3Q86UP9 236 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 EGFL6Q8IUX8 553 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 MKXQ8IYA7 352 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 DNAAF1Q8NEP3 725 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 OR4M1Q8NGD0 313 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 RHOXF1Q8NHV9 184 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 TNFRSF14Q92956 283 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 EMG1Q92979 244 aaKnown RBP14.4□□□□□ -0.1
NUP50-208ENST00000430547 FGGYQ96C11 551 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 ADAT3Q96EY9 351 aaPredicted RBP14.4□□□□□ -0.1
NUP50-208ENST00000430547 PELI1Q96FA3 418 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 FAM118AQ9NWS6 357 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 MTCH1Q9NZJ7 389 aa14.4□□□□□ -0.1
NUP50-208ENST00000430547 IGKV1-27A0A075B6S5 117 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 GPR137BO60478 399 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 CHRM2P08172 466 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 ATF1P18846 271 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 AZGP1P25311 298 aaKnown RBP14.39□□□□□ -0.11
NUP50-208ENST00000430547 MTCP1P56278 107 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 COL10A1Q03692 680 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 RAB40BQ12829 278 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 ALKBH1Q13686 389 aaKnown RBP14.39□□□□□ -0.11
NUP50-208ENST00000430547 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 LHFPL2Q6ZUX7 228 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 UTS2BQ765I0 119 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 GDPD3Q7L5L3 318 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 SYS1Q8N2H4 156 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 PNKDQ8N490 385 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 RNF166Q96A37 237 aaPredicted RBP14.39□□□□□ -0.11
NUP50-208ENST00000430547 SPSB1Q96BD6 273 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 HEXA-AS1Q9H8Q6 139 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 NEK6Q9HC98 313 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 AMBNQ9NP70 447 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 INPP5EQ9NRR6 644 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 SMPD3Q9NY59 655 aaPredicted RBP14.39□□□□□ -0.11
NUP50-208ENST00000430547 C1RLQ9NZP8 487 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 RPL36Q9Y3U8 105 aaKnown RBP14.39□□□□□ -0.11
NUP50-208ENST00000430547 MMP24Q9Y5R2 645 aa14.39□□□□□ -0.11
NUP50-208ENST00000430547 K7N7A8 449 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 NDUFA7O95182 113 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 RPSAP08865 295 aaKnown RBP14.38□□□□□ -0.11
NUP50-208ENST00000430547 PIPP12273 146 aaPredicted RBP14.38□□□□□ -0.11
NUP50-208ENST00000430547 EDDM3BP56851 147 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 MRPL28Q13084 256 aaKnown RBP14.38□□□□□ -0.11
NUP50-208ENST00000430547 KLHL22Q53GT1 634 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 TMEM200BQ69YZ2 307 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 C17orf107Q6ZR85 190 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 RDH12Q96NR8 316 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 OPALINQ96PE5 141 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 COMMD4Q9H0A8 199 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 SLITRK2Q9H156 845 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 VPREB3Q9UKI3 123 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 MYRFQ9Y2G1 1151 aa14.38□□□□□ -0.11
NUP50-208ENST00000430547 F8VVB4 439 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 F8VWA3 439 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 SPRY1O43609 319 aaPredicted RBP14.37□□□□□ -0.11
NUP50-208ENST00000430547 IGHA1P01876 353 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 GBX2P52951 348 aaPredicted RBP14.37□□□□□ -0.11
NUP50-208ENST00000430547 ERVFRD-1P60508 538 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 MIDNQ504T8 468 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 DHRS7BQ6IAN0 325 aaPredicted RBP14.37□□□□□ -0.11
NUP50-208ENST00000430547 OR51A4Q8NGJ6 313 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 ISG20L2Q9H9L3 353 aaKnown RBP14.37□□□□□ -0.11
NUP50-208ENST00000430547 ERVK13-1Q9NX77 482 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 GLS2Q9UI32 602 aa14.37□□□□□ -0.11
NUP50-208ENST00000430547 IGKV1-9A0A0C4DH69 117 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 TMEM212A6NML5 194 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 OR4C45A6NMZ5 311 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 HAND1O96004 215 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 CCDC159P0C7I6 412 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 CCL3L1P16619 93 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 LGALS4P56470 323 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 RELBQ01201 579 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 ZNF273Q14593 569 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 TAF9Q16594 264 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 OLFML2AQ68BL7 652 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 OR8H2Q8N162 312 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 FAM58AQ8N1B3 248 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 ZSCAN4Q8NAM6 433 aaPredicted RBP14.36□□□□□ -0.11
NUP50-208ENST00000430547 OR52I1Q8NGK6 324 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 OR13C9Q8NGT0 318 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 OR10AC1Q8NH08 325 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 HAVCR2Q8TDQ0 301 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
NUP50-208ENST00000430547 RBFOX1Q9NWB1 397 aaKnown RBP14.36□□□□□ -0.11
NUP50-208ENST00000430547 PCDHGB5Q9Y5G0 923 aa14.36□□□□□ -0.11
NUP50-208ENST00000430547 TRBV2A0A0J9YWF9 115 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 CLPSL1A2RUU4 121 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 ZNF737O75373 536 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 PRKACAP17612 351 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 BCL3P20749 454 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 GABRR1P24046 479 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 COX7A1P24310 79 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 PEX2P28328 305 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 SNU13P55769 128 aaKnown RBP14.35□□□□□ -0.11
NUP50-208ENST00000430547 EDDM3AQ14507 147 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 SPIN3Q5JUX0 258 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 BEND2Q8NDZ0 799 aa14.35□□□□□ -0.11
NUP50-208ENST00000430547 OR5AK2Q8NH90 309 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms