RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NUP205Q92621 2012 aa10.72□□□□□ -0.69
UBR4-205ENST00000417040 WIPI1Q5MNZ9 446 aaPredicted RBP10.71□□□□□ -0.69
UBR4-205ENST00000417040 LINC00615Q96LM1 132 aaPredicted RBP10.71□□□□□ -0.69
UBR4-205ENST00000417040 FOXB1Q99853 325 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 ZNF426Q9BUY5 554 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 GSX1Q9H4S2 264 aaPredicted RBP10.71□□□□□ -0.69
UBR4-205ENST00000417040 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 LINC01565O15544 149 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 CXCL2P19875 107 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 SEC11CQ9BY50 192 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 SLC25A1P53007 311 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 FAM162BQ5T6X4 162 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 DHRS11Q6UWP2 260 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 ETV3LQ6ZN32 361 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 LIMS2Q7Z4I7 341 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 RABEPKQ7Z6M1 372 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 SRD5A3Q9H8P0 318 aa10.71□□□□□ -0.69
UBR4-205ENST00000417040 NCBP2LA6PVI3 153 aaKnown RBP10.71□□□□□ -0.7
UBR4-205ENST00000417040 NAT2P11245 290 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 HTR1DP28221 377 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 KCNE4Q8WWG9 221 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 MOB3AQ96BX8 217 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 SLC17A5Q9NRA2 495 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 ZNF275Q9NSD4 429 aaPredicted RBP10.71□□□□□ -0.7
UBR4-205ENST00000417040 OR5H1A6NKK0 313 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 ALG1L2C9J202 215 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 EFNB2P52799 333 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 RNF165Q6ZSG1 346 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 ELSPBP1Q96BH3 223 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 EGLN1Q9GZT9 426 aa10.71□□□□□ -0.7
UBR4-205ENST00000417040 MYH14Q7Z406 1995 aaKnown RBP10.71□□□□□ -0.7
UBR4-205ENST00000417040 KLF9Q13886 244 aaPredicted RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 CTSVO60911 334 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 ANKRD34CP0C6C1 535 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 SULT1A2P50226 295 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 PPOXP50336 477 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 PPP1CAP62136 330 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 IL10RAQ13651 578 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 GUCA2BQ16661 112 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 MRPL24Q96A35 216 aaKnown RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 TREM2Q9NZC2 230 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 PROCRQ9UNN8 238 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 FIGNL2A6NMB9 653 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 GSTZ1O43708 216 aaPredicted RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 NGFP01138 241 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 COL19A1Q14993 1142 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 HES3Q5TGS1 186 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 OR1K1Q8NGR3 316 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 MENTQ9BUN1 341 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 NAT8Q9UHE5 227 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 H3BQ15 152 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 CIDEAO60543 219 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 CTLA4P16410 223 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 IL13RA2Q14627 380 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 PLA2G3Q9NZ20 509 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 SERGEFQ9UGK8 458 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 SSC5DA1L4H1 1573 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 TMEM30CPA0ZSE6 113 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 CCL7P80098 99 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 BCL2L2Q92843 193 aaPredicted RBP10.7□□□□□ -0.7
UBR4-205ENST00000417040 HES4Q9HCC6 221 aa10.7□□□□□ -0.7
UBR4-205ENST00000417040 CHST1O43916 411 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 TUSC1Q2TAM9 212 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 PWWP2BQ6NUJ5 590 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 CBLN3Q6UW01 205 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 OR8B12Q8NGG6 310 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 RNF2Q99496 336 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 ELOA3CA0A087WX78 387 aaPredicted RBP10.69□□□□□ -0.7
UBR4-205ENST00000417040 DHRS3O75911 302 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 MMP9P14780 707 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 CRISP2P16562 243 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 FKBP2P26885 142 aaKnown RBP10.69□□□□□ -0.7
UBR4-205ENST00000417040 Q56UQ5 140 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 MRPL54Q6P161 138 aaKnown RBP10.69□□□□□ -0.7
UBR4-205ENST00000417040 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 ORM2P19652 201 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 RAG2P55895 527 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 HLA-DRB5Q30154 266 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 OR2T6Q8NHC8 308 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 Q9N2K0 584 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 WASHC3Q9Y3C0 194 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 TOGARAM1Q9Y4F4 1720 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 DCAF12L2Q5VW00 463 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 ONECUT1Q9UBC0 465 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 PRSS50Q9UI38 385 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 SLC22A20A6NK97 555 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 H3BVH4 76 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 PLPP3O14495 311 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 ACTL6AO96019 429 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 HMGA2P52926 109 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 LYG1Q8N1E2 194 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms