RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 CD2P06729 351 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 SFTPBP07988 381 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 IGFBP3P17936 291 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 RAB3AP20336 220 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 DUSP1P28562 367 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 OR3A4PP47883 348 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 DLX1P56177 255 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 GABARAPL2P60520 117 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 BDH1Q02338 343 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 PRB3Q04118 309 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 EMX1Q04741 257 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 PDZK1IP1Q13113 114 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 KISS1Q15726 138 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 TBCEQ15813 527 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 SMIM21Q3B7S5 101 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 METAP1DQ6UB28 335 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 BTN2A1Q7KYR7 527 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 SLC36A1Q7Z2H8 476 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 SATL1Q86VE3 508 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 PRIMA1Q86XR5 153 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM185AQ8NFB2 350 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 OR5D14Q8NGL3 314 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 UFD1Q92890 307 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 EMG1Q92979 244 aaKnown RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM203Q969S6 136 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 C12orf43Q96C57 262 aaKnown RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 DERL3Q96Q80 235 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 NUDT16L1Q9BRJ7 211 aaKnown RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 BEX2Q9BXY8 128 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 FAM192AQ9GZU8 254 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 PPIL3Q9H2H8 161 aaKnown RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 NEK6Q9HC98 313 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 NOX4Q9NPH5 578 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 ACOT13Q9NPJ3 140 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM160Q9NX00 188 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 BLOC1S6Q9UL45 172 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 POLR3KQ9Y2Y1 108 aaPredicted RBP6.39□□□□□ -1.39
CPSF4-202ENST00000412686 ZANQ9Y493 2812 aa6.39□□□□□ -1.39
CPSF4-202ENST00000412686 DOCK11Q5JSL3 2073 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 IGHV3OR16-10A0A075B7F0 116 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 A0A1W2PP11 408 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 MEX3AA1L020 520 aaKnown RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SIGLEC5O15389 551 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 NDUFB3O43676 98 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 NDUFA2O43678 99 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 KDM4BO94953 1096 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 ALX3O95076 343 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 CDRT1O95170 752 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 KNG1P01042 644 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 MAS1P04201 325 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 CD1AP06126 327 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 ACAA1P09110 424 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM225BP0DP42 221 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 NDUFB7P17568 137 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 PRKACAP17612 351 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 BDKRB2P30411 391 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 PRDX2P32119 198 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 TGFBR2P37173 567 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 NPY4RP50391 375 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 PPP3R1P63098 170 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 IL13RA1P78552 427 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SRSF2Q01130 221 aaKnown RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 COL10A1Q03692 680 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 PAX8Q06710 450 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 MLLT11Q13015 90 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 PDCD1Q15116 288 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SSX1Q16384 188 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 ACSM3Q53FZ2 586 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 DDI2Q5TDH0 399 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 UNQ9370/PRO34162Q6UXP9 181 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SPARTQ8N0X7 666 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 OR10K1Q8NGX5 313 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 TNFAIP8L1Q8WVP5 186 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 RAB40AQ8WXH6 277 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 H1FXQ92522 213 aaKnown RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SDSLQ96GA7 329 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 GPER1Q99527 375 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 MGLLQ99685 303 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM138Q9NPI0 162 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 RASL12Q9NYN1 266 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SLC25A10Q9UBX3 287 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 CDC42EP3Q9UKI2 254 aa6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-202ENST00000412686 TLN2Q9Y4G6 2542 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 HIVEP2P31629 2446 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 PPIAL4CA0A0B4J2A2 164 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 KIR2DS1A0A191URI9 304 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM82A0PJX8 343 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 SIRPB1O00241 398 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 ENSAO43768 121 aaKnown RBP6.37□□□□□ -1.39
CPSF4-202ENST00000412686 SC5DO75845 299 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
CPSF4-202ENST00000412686 HAND1O96004 215 aa6.37□□□□□ -1.39
CPSF4-202ENST00000412686 FAM157CP0CG43 387 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms