RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 GMPPBQ9Y5P6 360 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 A6NIN4 97 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 ALX3O95076 343 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 HTR1AP08908 422 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 SAA4P35542 130 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 LGALS4P56470 323 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 ODF4Q2M2E3 257 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 ZBTB49Q6ZSB9 765 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 SYS1Q8N2H4 156 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 RHOXF1Q8NHV9 184 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 UBE2FQ969M7 185 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 SNX22Q96L94 193 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 MBOAT4Q96T53 435 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 RAB18Q9NP72 206 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 MTCH1Q9NZJ7 389 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 FRRS1LQ9P0K9 344 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 HHLA2Q9UM44 414 aa11.88□□□□□ -0.51
NIF3L1-205ENST00000409588 LOC107986453A0A1B0GWG9 222 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 TSPAN9O75954 239 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 CLPXO76031 633 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 APOL3O95236 402 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 MT-ND2P03891 347 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 VSIG8P0DPA2 414 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 OMGP23515 440 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 MTCP1P56278 107 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 RELBQ01201 579 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 RAB40BQ12829 278 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 GALEQ14376 348 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 ZIK1Q3SY52 487 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 TP53I3Q53FA7 332 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 KLHL22Q53GT1 634 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 PPP1R35Q8TAP8 253 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 TRMT10AQ8TBZ6 339 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF488Q96MN9 340 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 RDH12Q96NR8 316 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 S100A14Q9HCY8 104 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 C19orf12Q9NSK7 152 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 RPL36Q9Y3U8 105 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 RNF114Q9Y508 228 aa11.87□□□□□ -0.51
NIF3L1-205ENST00000409588 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 LOC100130705A0A1B0GUX0 176 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 TIMM23O14925 209 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 TFF1P04155 84 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OCM2P0CE71 109 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OCMP0CE72 109 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF20P17024 532 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 GABRB1P18505 474 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 ATF1P18846 271 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OR12D2P58182 307 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF146Q15072 292 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 TAF9Q16594 264 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 C11orf88Q6PI97 169 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 SLC25A26Q70HW3 274 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 GDPD3Q7L5L3 318 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OR5D14Q8NGL3 314 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 OR13D1Q8NGV5 346 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 LINC01006Q8NI28 216 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 FGGYQ96C11 551 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 CITED1Q99966 193 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 CDCA4Q9BXL8 241 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 PCDHGB5Q9Y5G0 923 aa11.86□□□□□ -0.51
NIF3L1-205ENST00000409588 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 TRBV2A0A0J9YWF9 115 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 FUOMA2VDF0 154 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 H3BUI4 141 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 J3QLW9 94 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF737O75373 536 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF728P0DKX0 622 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF19P17023 458 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 PEX2P28328 305 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 COL10A1Q03692 680 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 PDZK1IP1Q13113 114 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ALKBH1Q13686 389 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 HCP5Q6MZN7 132 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 SERPINA12Q8IW75 414 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 SAXO1Q8IYX7 474 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 FAM58AQ8N1B3 248 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 PQLC1Q8N2U9 271 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ASCC1Q8N9N2 400 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 LGALS12Q96DT0 336 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 MALSU1Q96EH3 234 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms