RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 PCYT1BQ9Y5K3 369 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-203ENST00000409101 CEPT1Q9Y6K0 416 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 SERTM2A0A1B0GWG4 89 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 OR7C2O60412 319 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ERGP11308 486 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 SSTP61278 116 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 TIGITQ495A1 244 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 DESI1Q6ICB0 168 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF529Q6P280 563 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 COMMD7Q86VX2 200 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ZBTB44Q8NCP5 570 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 GPR32P1Q8NGA4 272 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 OR4S1Q8NGB4 309 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 OR4S2Q8NH73 311 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 DEDD2Q8WXF8 326 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 CCL13Q99616 98 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF275Q9NSD4 429 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-203ENST00000409101 FAM53CQ9NYF3 392 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 MSRB2Q9Y3D2 182 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 IGHV1-69-2A0A0G2JMI3 117 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 TMEM127O75204 238 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 GZMHP20718 246 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ID1P41134 155 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 CCR6P51684 374 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 CDK5Q00535 292 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ZP4Q12836 540 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 COL19A1Q14993 1142 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ETFDHQ16134 617 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 OR10K2Q6IF99 312 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 SLC25A42Q86VD7 318 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 NEU4Q8WWR8 484 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 TIMP4Q99727 224 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ACTR3CQ9C0K3 210 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 HRH4Q9H3N8 390 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 A0A0G2JMZ2 1700 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 LRRC37A2A6NM11 1700 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 TRAV1-2A0A0B4J238 106 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 IGKV1-8A0A0C4DH67 115 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 CDK2AP1O14519 115 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 PDCD6O75340 191 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 EPXP11678 715 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 FGF7P21781 194 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 GNLYP22749 145 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 PRSS12P56730 875 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 GUCA2BQ16661 112 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 OR5A2Q8NGI9 324 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 OR2G3Q8NGZ4 309 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 OR52I2Q8NH67 350 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 RNASE6Q93091 150 aaKnown RBP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 VWCEQ96DN2 955 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 FAAP24Q9BTP7 215 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 GON7Q9BXV9 100 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 PECRQ9BY49 303 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 BIN3Q9NQY0 253 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ATP6V1G2-DDX39BF2Z307 99 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 IGKV1D-16P01601 117 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 MBP02144 154 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 RPL31P62899 125 aaKnown RBP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 TIAL1Q01085 375 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 FAM219BQ5XKK7 198 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ZAR1Q86SH2 424 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ITLN1Q8WWA0 313 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 SIGLEC12Q96PQ1 595 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 SPSB2Q99619 263 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 HSD17B10Q99714 261 aaKnown RBP4.4□□□□□ -1.71
SCN3A-203ENST00000409101 CHRNA10Q9GZZ6 450 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 PITPNC1Q9UKF7 332 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 MCM3APO60318 1980 aa4.4□□□□□ -1.71
SCN3A-203ENST00000409101 KIAA0100Q14667 2235 aaKnown RBP4.39□□□□□ -1.71
SCN3A-203ENST00000409101 SLC17A2O00624 439 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 TCRBP04435 133 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 TFAP2AP05549 437 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 METTL15P1P0C7V9 234 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
SCN3A-203ENST00000409101 EPHA2P29317 976 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 PRDX2P32119 198 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 PMELP40967 661 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 LIMK1P53667 647 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 NHLH1Q02575 133 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 LY6EQ16553 131 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 RBPMS2Q6ZRY4 209 aaKnown RBP4.39□□□□□ -1.71
SCN3A-203ENST00000409101 PHC2Q8IXK0 858 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 POM121Q96HA1 1249 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 SLC52A3Q9NQ40 469 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 PUS1Q9Y606 427 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCN3A-203ENST00000409101 MICAL3Q7RTP6 2002 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 NKX2-6A6NCS4 301 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 GLI4P10075 376 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 TGM1P22735 817 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 SSBP1Q04837 148 aaKnown RBP4.39□□□□□ -1.71
SCN3A-203ENST00000409101 MMDQ15546 238 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 CLEC18CQ8NCF0 446 aa4.39□□□□□ -1.71
SCN3A-203ENST00000409101 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms