RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 VCX3AQ9NNX9 186 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 RBFOX1Q9NWB1 397 aaKnown RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 DOCK11Q5JSL3 2073 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 ZFHX3Q15911 3703 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 TRAV20A0A0B4J274 112 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 MEGF11A6BM72 1044 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 RFPL4AA6NLU0 287 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 KIAA1324LA8MWY0 1029 aaPredicted RBP15.98■□□□□ 0.15
HOXA9-202ENST00000396345 A8MXK9 166 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 RFPL4AL1F8VTS6 287 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 KDM4BO94953 1096 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 SRMP19623 302 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 AMY2BP19961 511 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 NPY4RP50391 375 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 DVL1P1P54792 670 aaPredicted RBP15.98■□□□□ 0.15
HOXA9-202ENST00000396345 WDR25Q64LD2 544 aaPredicted RBP15.98■□□□□ 0.15
HOXA9-202ENST00000396345 ZNF788Q6ZQV5 615 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 FAM58AQ8N1B3 248 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 FAM216BQ8N7L0 139 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 PNLDC1Q8NA58 520 aaKnown RBP15.98■□□□□ 0.15
HOXA9-202ENST00000396345 MUL1Q969V5 352 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 TMEM186Q96B77 213 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 MED30Q96HR3 178 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 GAFA1Q96PS6 74 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 FAM192AQ9GZU8 254 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 SLITRK2Q9H156 845 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 HIF1ANQ9NWT6 349 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 OR14J1Q9UGF5 321 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 ZNF222Q9UK12 451 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 KCNS2Q9ULS6 477 aa15.98■□□□□ 0.15
HOXA9-202ENST00000396345 HIVEP2P31629 2446 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 A0A1B0GW55 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 A8MV72 311 aaPredicted RBP15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DVL1O14640 695 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 NDUFB3O43676 98 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 ARL6IP5O75915 188 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 KNG1P01042 644 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L2P0CJ85 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L3P0CJ86 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L4P0CJ87 422 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L5P0CJ88 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L6P0CJ89 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L7P0CJ90 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 PRDX2P32119 198 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 PTGFRP43088 359 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 OR3A4PP47883 348 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 IL13RA1P78552 427 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 IKZF1Q13422 519 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4L9Q6RFH8 374 aaPredicted RBP15.97■□□□□ 0.15
HOXA9-202ENST00000396345 FIP1L1Q6UN15 594 aaKnown RBP15.97■□□□□ 0.15
HOXA9-202ENST00000396345 C1QL2Q7Z5L3 287 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 CDH26Q8IXH8 852 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 JAGN1Q8N5M9 183 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 NKAIN3Q8N8D7 197 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 PXT1Q8NFP0 134 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 ELL3Q9HB65 397 aaPredicted RBP15.97■□□□□ 0.15
HOXA9-202ENST00000396345 RHOFQ9HBH0 211 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 DUX4Q9UBX2 424 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 OR5V1Q9UGF6 321 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 POLR3KQ9Y2Y1 108 aaPredicted RBP15.97■□□□□ 0.15
HOXA9-202ENST00000396345 ARHGAP32A7KAX9 2087 aa15.97■□□□□ 0.15
HOXA9-202ENST00000396345 C2CD3Q4AC94 2353 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 TRDV1A0A1B0GX56 115 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 SIGLEC5O15389 551 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 SFTPBP07988 381 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 CALCBP10092 127 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 PRKACAP17612 351 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 RSU1Q15404 277 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 CD200R1LQ6Q8B3 271 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 ASCL4Q6XD76 172 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 LRRTM1Q86UE6 522 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 CD177Q8N6Q3 437 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 SDSLQ96GA7 329 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 S100A13Q99584 98 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 IL36RNQ9UBH0 155 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 ING4Q9UNL4 249 aa15.96■□□□□ 0.15
HOXA9-202ENST00000396345 NSD1Q96L73 2696 aaPredicted RBP15.96■□□□□ 0.15
HOXA9-202ENST00000396345 TRIM64CA6NLI5 447 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 CDRT1O95170 752 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 SELLP14151 372 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 ADRA2CP18825 462 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 GALP22466 123 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 CALRP27797 417 aaKnown RBP15.95■□□□□ 0.14
HOXA9-202ENST00000396345 CEBPDP49716 269 aaPredicted RBP15.95■□□□□ 0.14
HOXA9-202ENST00000396345 LRRC10Q5BKY1 277 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 ST8SIA4Q92187 359 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 METTL9Q9H1A3 318 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 CNTD2Q9H8S5 307 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 MAB21L2Q9Y586 359 aa15.95■□□□□ 0.14
HOXA9-202ENST00000396345 SONP18583 2426 aaKnown RBP15.94■□□□□ 0.14
HOXA9-202ENST00000396345 LOC105371242A0A075B767 164 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 PPIAL4CA0A0B4J2A2 164 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 FCN3O75636 299 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 MTNR1BP49286 362 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 BMXP51813 675 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 SNU13P55769 128 aaKnown RBP15.94■□□□□ 0.14
HOXA9-202ENST00000396345 DGUOKQ16854 277 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 CD276Q5ZPR3 534 aa15.94■□□□□ 0.14
HOXA9-202ENST00000396345 GLT8D1Q68CQ7 371 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms