RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 LOC102725191A0A1B0GVB3 256 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 OR5H8P0DN80 308 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 ZNF14P17017 642 aaPredicted RBP17.95■□□□□ 0.46
CLK3-202ENST00000395066 ISOC2Q96AB3 205 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 GHRLQ9UBU3 117 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 DKKL1Q9UK85 242 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 PADI1Q9ULC6 663 aa17.95■□□□□ 0.46
CLK3-202ENST00000395066 MED19A0JLT2 244 aaPredicted RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 A6NLC8 198 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 ZNF850A8MQ14 1090 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 DIRAS3O95661 229 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 SNCAP37840 140 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 ZNF84P51523 738 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 PIGPP57054 158 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 POLR2GP62487 172 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLK3-202ENST00000395066 PIGYQ3MUY2 71 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 MIDNQ504T8 468 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 KRBOX4Q5JUW0 171 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 SGPP2Q8IWX5 399 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 AKR7LQ8NHP1 331 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 REEP6Q96HR9 211 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 IP6K3Q96PC2 410 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 FAM212BQ9NTI7 297 aaPredicted RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 METTL1Q9UBP6 276 aaKnown RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 ANXA10Q9UJ72 324 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 TUBD1Q9UJT1 453 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 PTRH2Q9Y3E5 179 aaKnown RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 K7ESF4 209 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 XRCC2O43543 280 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 UMODP07911 640 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 OTX1P32242 354 aaPredicted RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 NOVA1P51513 510 aaKnown RBP17.94■□□□□ 0.46
CLK3-202ENST00000395066 RSU1Q15404 277 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 PHLDA2Q53GA4 152 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 FAM209BQ5JX69 171 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 TDHQ8IZJ6 230 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 UBAC2Q8NBM4 344 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 TUBA4BQ9H853 241 aa17.94■□□□□ 0.46
CLK3-202ENST00000395066 M0R036 132 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 LIFP15018 202 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 KDF1Q8NAX2 398 aaPredicted RBP17.93■□□□□ 0.46
CLK3-202ENST00000395066 ALKBH3Q96Q83 286 aaPredicted RBP17.93■□□□□ 0.46
CLK3-202ENST00000395066 TCEAL7Q9BRU2 100 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 TRAV20A0A0B4J274 112 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 A0A0G2JMM0 328 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 A0A1W2PPB8 328 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 A0A1W2PPH5 198 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 A0A1W2PRS3 328 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 KIR3DP1A8MWS1 328 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 NME2P1O60361 137 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 GLP1RP43220 463 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 GUK1Q16774 197 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 TAAR9Q96RI9 348 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 SPACA1Q9HBV2 294 aa17.93■□□□□ 0.46
CLK3-202ENST00000395066 CRYM-AS1A6NIL9 109 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 GEMIN2O14893 280 aaKnown RBP17.92■□□□□ 0.46
CLK3-202ENST00000395066 IFNA21P01568 189 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 OR5AC1P0C628 307 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 B4GALT1P15291 398 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 MAML2Q8IZL2 1156 aaPredicted RBP17.92■□□□□ 0.46
CLK3-202ENST00000395066 COMMD1Q8N668 190 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 MR1Q95460 341 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 C20orf24Q9BUV8 137 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 FOXD3Q9UJU5 478 aaPredicted RBP17.92■□□□□ 0.46
CLK3-202ENST00000395066 IGHV1-45A0A0A0MS14 117 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 CCL4P13236 92 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 DAOP14920 347 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 PMELP40967 661 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 HIST1H3AP68431 136 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 ZNF616Q08AN1 781 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 HIST2H3PS2Q5TEC6 136 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 HIST2H3AQ71DI3 136 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 C5orf24Q7Z6I8 188 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 YRDCQ86U90 279 aaKnown RBP17.92■□□□□ 0.46
CLK3-202ENST00000395066 SPTSSAQ969W0 71 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 CRLF2Q9HC73 371 aa17.92■□□□□ 0.46
CLK3-202ENST00000395066 EIF1BO60739 113 aaKnown RBP17.91■□□□□ 0.46
CLK3-202ENST00000395066 LCATP04180 440 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 RAB5AP20339 215 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 CXCL12P48061 93 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 FHITP49789 147 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 LYZL2Q7Z4W2 148 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 TMEM156Q8N614 296 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 LINC00469Q8N7U9 141 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 OR5L1Q8NGL2 311 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 OR11L1Q8NGX0 322 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 SCRT1Q9BWW7 348 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 EIF5A2Q9GZV4 153 aaKnown RBP17.91■□□□□ 0.46
CLK3-202ENST00000395066 PLEKHA2Q9HB19 425 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 CCDC187A0A096LP49 1063 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 IGKV1-12A0A0C4DH73 117 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 IGKV1D-12P01611 117 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 CTSDP07339 412 aaPredicted RBP17.91■□□□□ 0.46
CLK3-202ENST00000395066 COX6A1P12074 109 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 ECI1P42126 302 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 STARD6P59095 220 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 SAP25Q8TEE9 199 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 FRYQ5TBA9 3013 aa17.91■□□□□ 0.46
CLK3-202ENST00000395066 hCG_1809904A0A1W2PP81 198 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 A0A1W2PR64 198 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms