RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF92Q03936 586 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 OR2F1Q13607 317 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 FANCMQ8IYD8 2048 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PP11 408 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 NME2P1O60361 137 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 NGFP01138 241 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 CALCRP30988 508 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 F2RL1P55085 397 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 FDX2Q6P4F2 183 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 OR13C8Q8NGS7 320 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 SNCAP37840 140 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 OR10AD1Q8NGE0 317 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 OR4A16Q8NH70 328 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 GALMQ96C23 342 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 SLC25A38Q96DW6 304 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 C2orf50Q96LR7 162 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 ZNF703Q9H7S9 590 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 FAM212BQ9NTI7 297 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 COL6A6A6NMZ7 2263 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 POLEQ07864 2286 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 SSX5O60225 188 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 KLF3P57682 345 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 PDZK1IP1Q13113 114 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 G6PC2Q9NQR9 355 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 KIF25Q9UIL4 384 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 CDIPTO14735 213 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
TCOF1-202ENST00000377797 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 FAM117AQ9C073 453 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 PCNX2A6NKB5 2137 aa12.67□□□□□ -0.38
TCOF1-202ENST00000377797 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 FAM90A27PA6NNH2 459 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 IFNA10P01566 189 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 TNFRSF1AP19438 455 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 HBG1P69891 147 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 HBG2P69892 147 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 SLC25A53Q5H9E4 307 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 SLC25A40Q8TBP6 338 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 CACNA1DQ01668 2161 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
TCOF1-202ENST00000377797 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
TCOF1-202ENST00000377797 EFNB1P98172 346 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-202ENST00000377797 PLPPR2Q96GM1 343 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 MED30Q96HR3 178 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 CLPSP04118 112 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 CEACAM1P13688 526 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 GPR12P47775 334 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 ST6GAL2Q96JF0 529 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 TIMP4Q99727 224 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 FN3KRPQ9HA64 309 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-202ENST00000377797 ANXA10Q9UJ72 324 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 HPXP02790 462 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 RNF141Q8WVD5 230 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 PTX4Q96A99 478 aa12.66□□□□□ -0.38
TCOF1-202ENST00000377797 GPR31O00270 319 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 TOR1AO14656 332 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 PIGYQ3MUY2 71 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 ZNF626Q68DY1 528 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 OR5A2Q8NGI9 324 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 OR14K1Q8NGZ2 314 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 SCARB1Q8WTV0 552 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 SDSLQ96GA7 329 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 TAAR3PQ9P1P4 343 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 AMDHD2Q9Y303 409 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 CLDN16Q9Y5I7 305 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 B3GALNT1O75752 331 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 ZNF266Q14584 549 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 PLA1AQ53H76 456 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 H2BFWTQ7Z2G1 175 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 RPS4Y2Q8TD47 263 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 LRRC29Q8WV35 223 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 PFDN5Q99471 154 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 ERRFI1Q9UJM3 462 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-202ENST00000377797 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
TCOF1-202ENST00000377797 hCG_1809904A0A1W2PP81 198 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PPE2 198 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PR64 198 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PRV1 198 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 TUBG1P23258 451 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 SNAI3Q3KNW1 292 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 SLC38A6Q8IZM9 456 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 ZNF680Q8NEM1 530 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-202ENST00000377797 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 PRR33A8MZF0 331 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 C1orf100Q5SVJ3 147 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 FAM185AQ8N0U4 392 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 SUCNR1Q9BXA5 334 aa12.65□□□□□ -0.38
TCOF1-202ENST00000377797 UNKLQ9H9P5 680 aaKnown RBP12.65□□□□□ -0.38
TCOF1-202ENST00000377797 DLL4Q9NR61 685 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms