RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MOB1AQ9H8S9 216 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 TVP23BQ9NYZ1 205 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 DNAJB9Q9UBS3 223 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 TMEM82A0PJX8 343 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 DHRS7CA6NNS2 312 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 E2F6O75461 281 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 ALDOBP05062 364 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 CHRM2P08172 466 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 CXCR4P61073 352 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 MINOS1Q5TGZ0 78 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 ZNF322Q6U7Q0 402 aaPredicted RBP11.05□□□□□ -0.64
CXCL12-202ENST00000374426 PLEKHG7Q6ZR37 379 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 GDPD3Q7L5L3 318 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 TRMT10AQ8TBZ6 339 aaKnown RBP11.05□□□□□ -0.64
CXCL12-202ENST00000374426 NSL1Q96IY1 281 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 ZNF714Q96N38 554 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 CNN2Q99439 309 aaKnown RBP11.05□□□□□ -0.64
CXCL12-202ENST00000374426 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 OR52A1Q9UKL2 312 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 R4GMQ9 66 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 MINOS1-NBL1R4GNA1 71 aa11.05□□□□□ -0.64
CXCL12-202ENST00000374426 IGKV1-27A0A075B6S5 117 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 IGHV2-26A0A0B4J1V2 119 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 PRKYO43930 277 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 PF4V1P10720 104 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 ANXA8P13928 327 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 AZGP1P25311 298 aaKnown RBP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 GYS2P54840 703 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 MEF2CQ06413 473 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 EDDM3AQ14507 147 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 C11orf87Q6NUJ2 197 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 BCDIN3DQ7Z5W3 292 aaKnown RBP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 ZNF676Q8N7Q3 588 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 TPRX1Q8N7U7 411 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 CEP19Q96LK0 163 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 CADM1Q9BY67 442 aaKnown RBP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 MRM2Q9UI43 246 aaKnown RBP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.04□□□□□ -0.64
CXCL12-202ENST00000374426 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
CXCL12-202ENST00000374426 FAM230AA0A1W2PPH8 454 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 hADV38S2A0JD32 116 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 IGHA1P01876 353 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 CCL1P22362 96 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 CRISP1P54107 249 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 GNGT1P63211 74 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 UBE2V2Q15819 145 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 CCDC121Q6ZUS5 278 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 SLC35F2Q8IXU6 374 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 OR52N4Q8NGI2 321 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 OR4P4Q8NGL7 312 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 NDNFQ8TB73 568 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 SLAMF9Q96A28 289 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 SNX22Q96L94 193 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 TMEM133Q9H2Q1 129 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 SNX5Q9Y5X3 404 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 LINC00312Q9Y6C7 94 aa11.03□□□□□ -0.64
CXCL12-202ENST00000374426 AQP12BA6NM10 295 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 M0R129 80 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 MMP23AO75900 390 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
CXCL12-202ENST00000374426 INMTO95050 263 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 PF4P02776 101 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 CALB2P22676 271 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 CD24P25063 80 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 KRTAP10-11P60412 298 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 SLC35A2P78381 396 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 PTGES3Q15185 160 aaKnown RBP11.02□□□□□ -0.65
CXCL12-202ENST00000374426 MEPCEQ7L2J0 689 aaKnown RBP11.02□□□□□ -0.65
CXCL12-202ENST00000374426 AQP12AQ8IXF9 295 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 MYDGFQ969H8 173 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 CHST6Q9GZX3 395 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 PAPOLBQ9NRJ5 636 aaKnown RBP11.02□□□□□ -0.65
CXCL12-202ENST00000374426 CLN6Q9NWW5 311 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 SLC7A11Q9UPY5 501 aa11.02□□□□□ -0.65
CXCL12-202ENST00000374426 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.65
CXCL12-202ENST00000374426 WI2-2373I1.2A0A1W2PRP0 233 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 TCRBV4S1A1TA0A5B7 111 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 H3BSH0 61 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 PSPNO60542 156 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 HAND1O96004 215 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 HOXB6P17509 224 aaKnown RBP11.01□□□□□ -0.65
CXCL12-202ENST00000374426 HTR1DP28221 377 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 ACTR3P61158 418 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 EFNB1P98172 346 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 IL18R1Q13478 541 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 GRK1Q15835 563 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 AADACL4Q5VUY2 407 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 C10orf99Q6UWK7 81 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 BAIAP2L2Q6UXY1 529 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 SLC25A26Q70HW3 274 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 SSX6Q7RTT6 188 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms