RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 FABP1P07148 127 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 HIST1H2AGP0C0S8 130 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGHV4-38-2P0DP08 117 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TNNI1P19237 187 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CALML3P27482 149 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 BRS3P32247 399 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 LEPP41159 167 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TNFSF9P41273 254 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 GSK3BP49841 420 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 FABP6P51161 128 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR2B8PP59922 312 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF45Q02386 682 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 GPS2Q13227 327 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 UNC119Q13432 240 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ICAM4Q14773 271 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PRR4Q16378 134 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 WDR82Q6UXN9 313 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 IZUMO2Q6UXV1 221 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 LANCL3Q6ZV70 420 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF100Q8IYN0 542 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 Q8N402 240 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLDN22Q8N7P3 220 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM35BQ8NCS4 154 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SLC30A7Q8NEW0 376 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 NDRG1Q92597 394 aaKnown RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 HIST1H2ACQ93077 130 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 GALNT14Q96FL9 552 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF414Q96IQ9 312 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 HARBI1Q96MB7 349 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 STACQ99469 402 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 LRRC2Q9BYS8 371 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 NOX3Q9HBY0 568 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM242Q9NWH2 141 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLN6Q9NWW5 311 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 RHBDL2Q9NX52 303 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF226Q9NYT6 803 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 POMT2Q9UKY4 750 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 KCNS2Q9ULS6 477 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 STYXL1Q9Y6J8 313 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 NCOA6Q14686 2063 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZANQ9Y493 2812 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 F5H697 171 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 LINC01619G3V211 115 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PHYHO14832 338 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ARPC2O15144 300 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SURF4O15260 269 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 MFSD11O43934 449 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SCGB2A1O75556 95 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGF2P01344 180 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SERPINE1P05121 402 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TSPAN8P19075 237 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF10P21506 573 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 GABRR1P24046 479 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 EEF1B2P24534 225 aaKnown RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SSTR2P30874 369 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 IFNGR2P38484 337 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TNNT2P45379 298 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CRISP3P54108 245 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CTBP2P56545 445 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 BFSP2Q13515 415 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 KLF9Q13886 244 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 JOSD1Q15040 202 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ARL13AQ5H913 290 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 RBM48Q5RL73 367 aaKnown RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PPM1LQ5SGD2 360 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 DCST2Q5T1A1 773 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 C9orf64Q5T6V5 341 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 RUSC1-AS1Q66K80 236 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PTRHD1Q6GMV3 140 aaKnown RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 C6orf120Q7Z4R8 191 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PNKDQ8N490 385 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM229BQ8NBD8 167 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 BEST4Q8NFU0 473 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR5B17Q8NGF7 314 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 MRAPQ8TCY5 172 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 C19orf24Q9BVV8 132 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CTPS2Q9NRF8 586 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CMTM6Q9NX76 183 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF282Q9UDV7 671 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 SCP2D1Q9UJQ7 156 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 STUB1Q9UNE7 303 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 C22orf24Q9Y442 160 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ENPP4Q9Y6X5 453 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CR1P17927 2039 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 TRPC5OSA6NMA1 111 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 C21orf140B9A014 251 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLDN25C9JDP6 229 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 MAGEB4O15481 346 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 FCN3O75636 299 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGHV3-48P01763 117 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 APOEP02649 317 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 MYOD1P15172 320 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 ABOP16442 354 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 RPA3P35244 121 aaPredicted RBP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 CD200P41217 278 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 DNASE1L1P49184 302 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 PPOXP50336 477 aa1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 RPS11P62280 158 aaKnown RBP eCLIP1.38□□□□□ -2.19
SMARCAD1-202ENST00000359052 POU2AF1Q16633 256 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms