RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CFPP27918 469 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 CCKARP32238 428 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 IDH3GP51553 393 aaPredicted RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 OR10A3P58181 314 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 SSBP1Q04837 148 aaKnown RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 FAM27E3Q08E93 113 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 Q3ZCU0 254 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 TMEM255AQ5JRV8 349 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 SLC36A1Q7Z2H8 476 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 MYPOPQ86VE0 399 aaPredicted RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 COMMD2Q86X83 199 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 PAQR4Q8N4S7 273 aaPredicted RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 FGGYQ96C11 551 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 ADAT3Q96EY9 351 aaPredicted RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 REEP6Q96HR9 211 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 FAM71F1Q96KD3 344 aaPredicted RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 CHIAQ9BZP6 476 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 MFFQ9GZY8 342 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 CKLFQ9UBR5 152 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF69Q9UC07 566 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ITPR1Q14643 2758 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 hCG_38984A0A1B0GV85 526 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ARPC5O15511 151 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 HTR3BO95264 441 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 CD8AP01732 235 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ACAA1P09110 424 aaPredicted RBP10.99□□□□□ -0.65
DDX39A-202ENST00000324340 CALCBP10092 127 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF35P13682 527 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 CCNOP22674 350 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 CHRNB4P30926 498 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 WNT5AP41221 380 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 RAD52P43351 418 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ART1P52961 327 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF92Q03936 586 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 RBMS2Q15434 407 aaKnown RBP10.99□□□□□ -0.65
DDX39A-202ENST00000324340 OR8B8Q15620 311 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 GFOD2Q3B7J2 385 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 SLC25A35Q3KQZ1 300 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 FBXL19-AS1Q494R0 122 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 FAM76BQ5HYJ3 339 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 SSX8Q7RTT4 187 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 OR2AK2Q8NG84 335 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
DDX39A-202ENST00000324340 SEC11CQ9BY50 192 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 OPA3Q9H6K4 179 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 CA10Q9NS85 328 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 TAS2R4Q9NYW5 299 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
DDX39A-202ENST00000324340 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 V9GY05 133 aa10.99□□□□□ -0.65
DDX39A-202ENST00000324340 IGHV1-18A0A0C4DH31 117 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 MEGF11A6BM72 1044 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 C16orf97H3BN30 126 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDX39A-202ENST00000324340 AGFG2O95081 481 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 NGFP01138 241 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 CECR9P0C854 216 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 PRF1P14222 555 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 THBS4P35443 961 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 ASCL1P50553 236 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 FAM3AP98173 230 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 PPA1Q15181 289 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 PAN3Q58A45 887 aaKnown RBP10.98□□□□□ -0.65
DDX39A-202ENST00000324340 NKAPLQ5M9Q1 402 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 LYPD6Q86Y78 171 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 LDLRAD3Q86YD5 345 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF101Q8IZC7 436 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 SEMA6DQ8NFY4 1073 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 OR5D14Q8NGL3 314 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 PP6455Q8WZ26 134 aa10.98□□□□□ -0.65
DDX39A-202ENST00000324340 METTL1Q9UBP6 276 aaKnown RBP10.98□□□□□ -0.65
DDX39A-202ENST00000324340 KANTRA0A1W2PQU2 76 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 FGF16O43320 207 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 BCL2L11O43521 198 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 SMPD2O60906 423 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 MAS1P04201 325 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 FBP1P09467 338 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF20P17024 532 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 ATF1P18846 271 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 TUBG1P23258 451 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 ACKR3P25106 362 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 GSK3AP49840 483 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 MALLQ13021 153 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 SNTB1Q13884 538 aaKnown RBP10.97□□□□□ -0.65
DDX39A-202ENST00000324340 DNLZQ5SXM8 178 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 TMEM42Q69YG0 159 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 SFRP4Q6FHJ7 346 aaPredicted RBP10.97□□□□□ -0.65
DDX39A-202ENST00000324340 MTFR2Q6P444 385 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 IL34Q6ZMJ4 242 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 FJX1Q86VR8 437 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
DDX39A-202ENST00000324340 NKAIN3Q8N8D7 197 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 C15orf54Q8N8G6 183 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 OR5L1Q8NGL2 311 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 CCDC107Q8WV48 283 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 MUCL1Q96DR8 90 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms