RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 A0A1W2PQD3 144 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 A0A1W2PRS3 328 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 OR7C2O60412 319 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 C1QL1O75973 258 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TNFSF15O95150 251 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CT45A8P0DMV1 189 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CT45A9P0DMV2 189 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PPIAL4GP0DN37 164 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PNMTP11086 282 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 IGFBP3P17936 291 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CEACAM3P40198 252 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CEBPDP49716 269 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 EMP2P54851 167 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PAX2Q02962 417 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 NOGQ13253 232 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 RAB32Q13637 225 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ACOT6Q3I5F7 207 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF260Q3ZCT1 412 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CT45A2Q5DJT8 189 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 DCST2Q5T1A1 773 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PRAMEF5Q5TYX0 476 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 VN1R4Q7Z5H5 301 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 FAM219AQ8IW50 185 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF679Q8IYX0 411 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CYB561D1Q8N8Q1 229 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 NPEPL1Q8NDH3 523 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 OR52E1Q8NGJ3 308 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF519Q8TB69 540 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 GABRG3Q99928 467 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PDCD1LG2Q9BQ51 273 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 DNAJB12Q9NXW2 375 aaKnown RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 DAPP1Q9UN19 280 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 KCNK6Q9Y257 313 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TMED7Q9Y3B3 224 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM14AQ9Y6G1 99 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 GJE1A6NN92 205 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF736B4DX44 427 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 UPK3AO75631 287 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CYB5AP00167 134 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 CSN2P05814 226 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 SLC35E2P0CK97 266 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 GLB1P16278 677 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 RPL12P30050 165 aaKnown RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 P2RY2P41231 377 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TNFRSF4P43489 277 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 HINT1P49773 126 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 BLKP51451 505 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 SLC16A1P53985 500 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 RND3P61587 244 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 NTHL1P78549 312 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 DUSP2Q05923 314 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 HSPB3Q12988 150 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 SQSTM1Q13501 440 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 Q499Y3 187 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 C1orf100Q5SVJ3 147 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM225Q6GV28 225 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 Q6ZN92 141 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 ABHD12BQ7Z5M8 362 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 COMMD2Q86X83 199 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TGIF2LYQ8IUE0 185 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 SLC35F2Q8IXU6 374 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 APCDD1LQ8NCL9 501 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 OR4B1Q8NGF8 309 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM255BQ8WV15 326 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 RNF138Q8WVD3 245 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 SKA2Q8WVK7 121 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM37Q8WXS4 190 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 AQP3Q92482 292 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 RAB8BQ92930 207 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 IMMP2LQ96T52 175 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TTTY10Q9BZA0 68 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 PLK3Q9H4B4 646 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 G6PC2Q9NQR9 355 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 MRPL27Q9P0M9 148 aaKnown RBP5.84□□□□□ -1.47
ZNF540-201ENST00000316433 WIPI2Q9Y4P8 454 aa5.84□□□□□ -1.47
ZNF540-201ENST00000316433 TET1Q8NFU7 2136 aa5.84□□□□□ -1.48
ZNF540-201ENST00000316433 HEATR5BQ9P2D3 2071 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PPIAL4EA0A075B759 164 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PPIAL4CA0A0B4J2A2 164 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PPIAL4DF5H284 164 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SAP30O75446 220 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SRSF10O75494 262 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 TOX4O94842 621 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PPIAL4FP0DN26 164 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 FCGR2CP31995 323 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 CCR2P41597 374 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 LSSP48449 732 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RAB9AP51151 201 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RAB11AP62491 216 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ADAM8P78325 824 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PNRC1Q12796 327 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MPV17LQ2QL34 196 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 LY6G5CQ5SRR4 150 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 DNM1P34Q6PK57 102 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 COLCA1Q6ZS62 124 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 TMPRSS12Q86WS5 348 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SAXO1Q8IYX7 474 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 OR4D6Q8NGJ1 314 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SLC46A1Q96NT5 459 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms