RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TMEM187Q14656 261 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 BTBD17A6NE02 478 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 SPRY1O43609 319 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-202ENST00000310645 DUSP1P28562 367 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 GALNSP34059 522 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 RUNX1Q01196 453 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL6A2-202ENST00000310645 FAM180AQ6UWF9 173 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 DDIT4LQ96D03 193 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 SSX3Q99909 188 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 TLCD2A6NGC4 264 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 PHOX2AO14813 284 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 CAPZBP47756 277 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 ARL4DP49703 201 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
COL6A2-202ENST00000310645 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 DEFB119Q8N690 84 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF160Q9HCG1 818 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 PIGLQ9Y2B2 252 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 TRIOO75962 3097 aa12.83□□□□□ -0.36
COL6A2-202ENST00000310645 TSTD3H0UI37 97 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 HSD17B6O14756 317 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SFTPDP35247 375 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 CSNK1A1P48729 337 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 ZP4Q12836 540 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 MYBPHQ13203 477 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 HIKESHIQ53FT3 197 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 DTX1Q86Y01 620 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 BATF2Q8N1L9 274 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 HIST3H2BBQ8N257 126 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 OIT3Q8WWZ8 545 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 FRZBQ92765 325 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 CCDC187A0A096LP49 1063 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 OR5H15A6NDH6 313 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 OR5H1A6NKK0 313 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 IGHG1P01857 330 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 CA3P07451 260 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 DBHP09172 617 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 PPA1Q15181 289 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SSX2Q16385 188 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 TMEM123Q8N131 208 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 LRRC18Q8N456 261 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 MOB1AQ9H8S9 216 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 UNKLQ9H9P5 680 aaKnown RBP12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 GPR173Q9NS66 373 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 MMACHCQ9Y4U1 282 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 THADAQ6YHU6 1953 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 FAM230AA0A1W2PPH8 454 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 LIPT2A6NK58 231 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SRP19P09132 144 aaKnown RBP12.82□□□□□ -0.36
COL6A2-202ENST00000310645 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
COL6A2-202ENST00000310645 LYZL4Q96KX0 146 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 SNX22Q96L94 193 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 LRRC61Q9BV99 259 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 B3GAT1Q9P2W7 334 aa12.82□□□□□ -0.36
COL6A2-202ENST00000310645 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 STX12Q86Y82 276 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 OR1N1Q8NGS0 311 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 OR14L1PQ8NHC6 308 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 TVP23CQ96ET8 276 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF43P17038 809 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 MAS1LP35410 378 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 MTCP1P56278 107 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
COL6A2-202ENST00000310645 SMAD4Q13485 552 aaKnown RBP12.81□□□□□ -0.36
COL6A2-202ENST00000310645 SPSB3Q6PJ21 355 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 OR2C3Q8N628 320 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
COL6A2-202ENST00000310645 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 KLRF1Q9NZS2 232 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 TRANK1O15050 2925 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 IGKV3D-11A0A0A0MRZ8 115 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 EFNA2O43921 213 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 SSSCA1O60232 199 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF124Q15973 351 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 SLC22A25Q6T423 547 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 LGI3Q8N145 548 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 SLC35G3Q8N808 338 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 ABHD5Q8WTS1 349 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 HAS2Q92819 552 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 MRPL13Q9BYD1 178 aaKnown RBP12.81□□□□□ -0.36
COL6A2-202ENST00000310645 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
COL6A2-202ENST00000310645 A0A087WZY1 265 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 NKX2-6A6NCS4 301 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 MSTNO14793 375 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 PGA4P0DJD7 388 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms