RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-201ENST00000300527 SMCO3A2RU48 225 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 CRYM-AS1A6NIL9 109 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 PGA4P0DJD7 388 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 PGA5P0DJD9 388 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 CASP6P55212 293 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 EWSR1Q01844 656 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL6A2-201ENST00000300527 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 LMX1AQ8TE12 382 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 FRZBQ92765 325 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 STRAPQ9Y3F4 350 aaKnown RBP12.84□□□□□ -0.35
COL6A2-201ENST00000300527 OR5H15A6NDH6 313 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 OR5H1A6NKK0 313 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 FTCDNL1E5RQL4 147 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 TSPAN2O60636 221 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 MMP9P14780 707 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 MTCP1P56278 107 aa12.83□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF385CQ66K41 422 aaPredicted RBP12.83□□□□□ -0.35
COL6A2-201ENST00000300527 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.35
COL6A2-201ENST00000300527 URB1O60287 2271 aaKnown RBP12.83□□□□□ -0.36
COL6A2-201ENST00000300527 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-201ENST00000300527 DBHP09172 617 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 FOLR1P15328 257 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF17P17021 662 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 EFNA3P52797 238 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 HIST2H3PS2Q5TEC6 136 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-201ENST00000300527 NAA60Q9H7X0 242 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 ANXA10Q9UJ72 324 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 CYTIPO60759 359 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 OR2AE1Q8NHA4 323 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 MISP3Q96FF7 219 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 GINS3Q9BRX5 216 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 ATG101Q9BSB4 218 aa12.83□□□□□ -0.36
COL6A2-201ENST00000300527 HLA-HP01893 362 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 DUSP1P28562 367 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 PMELP40967 661 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 HERV-K104P61576 105 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 MYBPHQ13203 477 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 DOK3Q7L591 496 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 MALSU1Q96EH3 234 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 FAM210BQ96KR6 192 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 TUBD1Q9UJT1 453 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 SDK2Q58EX2 2172 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 IGHG1P01857 330 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 IGKV3-11P04433 115 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 EPHA1P21709 976 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF124Q15973 351 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 DEFB133Q30KQ1 61 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 PLPP5Q8NEB5 264 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 OR5C1Q8NGR4 320 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 DDIT4LQ96D03 193 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 GALNT14Q96FL9 552 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 WASF3Q9UPY6 502 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-201ENST00000300527 CCDC187A0A096LP49 1063 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 CEACAM18A8MTB9 384 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-201ENST00000300527 MYF5P13349 255 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 FZD2Q14332 565 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 TGIF2LXQ8IUE1 241 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 HIST3H2BBQ8N257 126 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 OR10AD1Q8NGE0 317 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
COL6A2-201ENST00000300527 THOC3Q96J01 351 aaKnown RBP12.82□□□□□ -0.36
COL6A2-201ENST00000300527 PNLIPP16233 465 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 CSNK1A1P48729 337 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 OR2C3Q8N628 320 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 GAB2Q9UQC2 676 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 H3BMH7 237 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 SLC31A2O15432 143 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 GNRH1P01148 92 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 FBLP22087 321 aaKnown RBP12.81□□□□□ -0.36
COL6A2-201ENST00000300527 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
COL6A2-201ENST00000300527 COL19A1Q14993 1142 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 MUC22E2RYF6 1773 aaPredicted RBP12.81□□□□□ -0.36
COL6A2-201ENST00000300527 TLCD2A6NGC4 264 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 K7N7A8 449 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 HSD17B6O14756 317 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms