RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SSBP1Q04837 148 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 ECSCRQ19T08 205 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 FAAP20Q6NZ36 180 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM123Q8N131 208 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 EID2BQ96D98 161 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 SIRT3Q9NTG7 399 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 CLCF1Q9UBD9 225 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 PLEKHB1Q9UF11 243 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 SHROOM3Q8TF72 1996 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM210A6NLX4 147 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 PRR33A8MZF0 331 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 GPX5O75715 221 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 FGF5P12034 268 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 LSM6P62312 80 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 TGIF1Q15583 401 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 LYG2Q86SG7 212 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 TGIF2LYQ8IUE0 185 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 TGIF2LXQ8IUE1 241 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 RIMKLAQ8IXN7 391 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 OR4S2Q8NH73 311 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 ARHGAP5-AS1Q96IT6 56 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 NRTNQ99748 197 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 WDR61Q9GZS3 305 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 RNF167Q9H6Y7 350 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 RYDENQ9NUL5 291 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 IL20Q9NYY1 176 aa6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 SF3B6Q9Y3B4 125 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-202ENST00000297933 RAB19A4D1S5 217 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR6C68A6NDL8 312 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CDIPTO14735 213 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM127O75204 238 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 WNT1P04628 370 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC25A5P05141 298 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR4E1P0C645 316 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 JUNBP17275 347 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 VDAC1P21796 283 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 PSMB6P28072 239 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CD80P33681 288 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ZBTB37Q5TC79 503 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ITPKCQ96DU7 683 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 C10orf90Q96M02 699 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 UCN2Q96RP3 112 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF230Q9UIE0 474 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 GNG7O60262 68 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 PDCD6O75340 191 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CEACAM1P13688 526 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 BCL3P20749 454 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CDKN2AP42771 156 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ERVFRD-1P60508 538 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 BTG1P62324 171 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CD226Q15762 336 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 AVPI1Q5T686 147 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF485Q8NCK3 441 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR4D10Q8NGI6 311 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 MOGAT1Q96PD6 335 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SMLR1H3BR10 107 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CD160O95971 181 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 HTN1P15515 57 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 PDLIM4P50479 330 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR2B8PP59922 312 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TOR2AQ5JU69 321 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 PXDC1Q5TGL8 231 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 C9orf40Q8IXQ3 194 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 C1orf174Q8IYL3 243 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SHISA5Q8N114 240 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC25A45Q8N413 288 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM251Q8N6I4 163 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC25A22Q9H936 323 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ADGRL4Q9HBW9 690 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 MARF1Q9Y4F3 1742 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 H3BP45 60 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 S100A8P05109 93 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 GIPP09681 153 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CTLA4P16410 223 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 PRSS12P56730 875 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 RBPMS2Q6ZRY4 209 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 FAM214BQ7L5A3 538 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 C6orf201Q7Z4U5 140 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 MRGPRGQ86SM5 289 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR8B12Q8NGG6 310 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR1L4Q8NGR5 311 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF721Q8TF20 911 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 BLNKQ8WV28 456 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 RPUSD4Q96CM3 377 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 GON7Q9BXV9 100 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM38BQ9NVV0 291 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 IGKV3-7A0A075B6H7 116 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM272A0A1B0GTI8 110 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TFAP2AP05549 437 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 HIST1H1DP16402 221 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 GPNMBQ14956 572 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 SPINK9Q5DT21 86 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF275Q9NSD4 429 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 OR1A1Q9P1Q5 309 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 CES1P1Q9UKY3 287 aa6.11□□□□□ -1.43
GAPVD1-202ENST00000297933 HRKO00198 91 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms