RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAHD2BQ6P2I3 314 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-227ENST00000640957 KLHL24Q6TFL4 600 aa12.1□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
SCARB2-227ENST00000640957 OR5D14Q8NGL3 314 aa12.1□□□□□ -0.47
SCARB2-227ENST00000640957 FAHD2AQ96GK7 314 aa12.1□□□□□ -0.47
SCARB2-227ENST00000640957 LYRM4Q9HD34 91 aa12.1□□□□□ -0.47
SCARB2-227ENST00000640957 A0A0J9YY10 115 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 CD55P08174 381 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
SCARB2-227ENST00000640957 FBXW4P57775 412 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 RAB11AP62491 216 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 HYAL1Q12794 435 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 LIME1Q9H400 295 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 GPR84Q9NQS5 396 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF850A8MQ14 1090 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 A8MVM7 634 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF25P17030 456 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-227ENST00000640957 FUT3P21217 361 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-227ENST00000640957 SLAMF6Q96DU3 332 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
SCARB2-227ENST00000640957 RER1O15258 196 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 FPR2P25090 351 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 CLDN17P56750 224 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 PKIAP61925 76 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 QRFPP83859 136 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 DEFB133Q30KQ1 61 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 PHF19Q5T6S3 580 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 FAM57BQ71RH2 274 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 MAMDC2Q7Z304 686 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-227ENST00000640957 SGPP2Q8IWX5 399 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-227ENST00000640957 HAS2Q92819 552 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 HIST1H2BLQ99880 126 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 OR14J1Q9UGF5 321 aa12.08□□□□□ -0.47
SCARB2-227ENST00000640957 GVINP1Q7Z2Y8 2422 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 DOCK11Q5JSL3 2073 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 BORCS7-ASMTA0A0B4J1R7 106 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.48
SCARB2-227ENST00000640957 HSD11B1P28845 292 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 GPR3P46089 330 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 FBXW12Q6X9E4 464 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 TBL1XR1Q9BZK7 514 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 AK3Q9UIJ7 227 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 MCTS1Q9ULC4 181 aaKnown RBP12.08□□□□□ -0.48
SCARB2-227ENST00000640957 GAB2Q9UQC2 676 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 IL12BP29460 328 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 FOXK1P85037 733 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 HMGN3Q15651 99 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 OPN5Q6U736 354 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 Q7L0L9 218 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 GALNT14Q96FL9 552 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 C1orf123Q9NWV4 160 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
SCARB2-227ENST00000640957 HLA-HP01893 362 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 HPNP05981 417 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 DBHP09172 617 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 GFERP55789 205 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 MPV17LQ2QL34 196 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 RTL10Q7L3V2 364 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 C11orf40Q8WZ69 217 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 GPR179Q6PRD1 2367 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 E9PLN8 166 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 TAAR5O14804 337 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 IL15RAQ13261 267 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 ELSPBP1Q96BH3 223 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 NPIPA1Q9UND3 350 aa12.07□□□□□ -0.48
SCARB2-227ENST00000640957 TMED7-TICAM2A0A0A6YYA0 188 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 IGHV3-20A0A0C4DH32 117 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 NUDT21O43809 227 aaKnown RBP12.06□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM127O75204 238 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 FAM3AP98173 230 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 TAF9Q16594 264 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 SLC43A2Q8N370 569 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 DTWD2Q8NBA8 298 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 KLHDC7BQ96G42 594 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 SPTBN2O15020 2390 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 F5H5K5 113 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-227ENST00000640957 PAX6P26367 422 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 SLC26A5P58743 744 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
SCARB2-227ENST00000640957 ROM1Q03395 351 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms