RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 APOA2P02652 100 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 CD79BP40259 229 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 GPM6AP51674 278 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 LUMP51884 338 aaPredicted RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 F2RL1P55085 397 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 UBE2MP61081 183 aaKnown RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 TNFAIP6P98066 277 aaPredicted RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 GK2Q14410 553 aaPredicted RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 PLGLAQ15195 96 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 C3AR1Q16581 482 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 TAF9Q16594 264 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 ATP1A1-AS1Q5TC04 95 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 CCDC190Q86UF4 302 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 FOXRED2Q8IWF2 684 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 OR2Z1Q8NG97 314 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 H1FXQ92522 213 aaKnown RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 FBXO17Q96EF6 278 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 S1PR3Q99500 378 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 SLIRPQ9GZT3 109 aaKnown RBP4.84□□□□□ -1.64
CHD2-227ENST00000637572 HSPB11Q9Y547 144 aa4.84□□□□□ -1.64
CHD2-227ENST00000637572 DNAJC13O75165 2243 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 MEIKINA0A087WXM9 373 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 TRAV38-1A0A0B4J264 116 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 LOC390937A0A1W2PQ73 354 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 PDCD6O75340 191 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 LY86O95711 162 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 PNPP00491 289 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 PMP22Q01453 160 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 INPP5JQ15735 1006 aaPredicted RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 TATDN3Q17R31 274 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 BEX5Q5H9J7 111 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 NSUN5P2Q63ZY6 315 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 H3F3CQ6NXT2 135 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 CCDC71Q8IV32 467 aaPredicted RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 LYSMD2Q8IV50 215 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 STOML3Q8TAV4 291 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 POC1BQ8TC44 478 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 CA10Q9NS85 328 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 NUP50Q9UKX7 468 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 OSGIN2Q9Y236 505 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 MEIS3P1A6NDR6 274 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 F5H0A9 414 aaPredicted RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 CTDSPLO15194 276 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 NEURL1O76050 574 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 S100A1P23297 94 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 ABLIM2Q6H8Q1 611 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 MDP1Q86V88 176 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 OR52I2Q8NH67 350 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 ABHD5Q8WTS1 349 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 MSI2Q96DH6 328 aaKnown RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 MED30Q96HR3 178 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 AUNIPQ9H7T9 357 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 TAAR3PQ9P1P4 343 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 LPAR3Q9UBY5 353 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 A6NIN4 97 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 GOSR2O14653 212 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 HS3ST1O14792 307 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 HIST1H1DP16402 221 aaKnown RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 CA6P23280 308 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 ZNF81P51508 661 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 OR10A3P58181 314 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 PSG4Q00888 419 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 DHODHQ02127 395 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 TIMM23BQ5SRD1 257 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 NRARPQ7Z6K4 114 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 LRRC20Q8TCA0 184 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 SECTM1Q8WVN6 248 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 WFDC6Q9BQY6 131 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 HES7Q9BYE0 225 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 AKIP1Q9NQ31 210 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 OR6C3Q9NZP0 311 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
CHD2-227ENST00000637572 GCN1Q92616 2671 aaKnown RBP4.83□□□□□ -1.64
CHD2-227ENST00000637572 TLN1Q9Y490 2541 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 PKDREJQ9NTG1 2253 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 TMEM235A6NFC5 223 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SLC33A1O00400 549 aaPredicted RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 MPPED1O15442 326 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SPRY3O43610 288 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 GPANK1O95872 356 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 MT-CO2P00403 227 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 ASCL1P50553 236 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RAG2P55895 527 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 EDDM3AQ14507 147 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IGFBP7Q16270 282 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SPATA46Q5T0L3 261 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CD276Q5ZPR3 534 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RPUSD3Q6P087 351 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 IQCF2Q8IXL9 164 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 OR2AE1Q8NHA4 323 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 GALMQ96C23 342 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SRXN1Q9BYN0 137 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 C11orf54Q9H0W9 315 aaPredicted RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 RBM38Q9H0Z9 239 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 TP53TG5Q9Y2B4 290 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 NINQ8N4C6 2090 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RALGAPA1Q6GYQ0 2036 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 425.7 ms