RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MS4A15Q8N5U1 240 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 GCSAMQ8N6F7 178 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 C19orf18Q8NEA5 215 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 UFD1Q92890 307 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 FGGYQ96C11 551 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 PPP1R3EQ9H7J1 279 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 C14orf119Q9NWQ9 140 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 ENPP5Q9UJA9 477 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 SF3B6Q9Y3B4 125 aaKnown RBP11.07□□□□□ -0.64
CTSA-213ENST00000606782 MPC1Q9Y5U8 109 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 PKD1L1Q8TDX9 2849 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 PNMA8CA0A1B0GUJ8 204 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 OOEPA6NGQ2 149 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 ZNF850A8MQ14 1090 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 H3BSH0 61 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 MMP9P14780 707 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 FAHP16930 419 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 FGF12P61328 243 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
CTSA-213ENST00000606782 CLVS2Q5SYC1 327 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 SFRP4Q6FHJ7 346 aaPredicted RBP11.06□□□□□ -0.64
CTSA-213ENST00000606782 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 FTMTQ8N4E7 242 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 PIGCQ92535 297 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
CTSA-213ENST00000606782 C1orf123Q9NWV4 160 aa11.06□□□□□ -0.64
CTSA-213ENST00000606782 SOX21Q9Y651 276 aaPredicted RBP11.06□□□□□ -0.64
CTSA-213ENST00000606782 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 A6NIN4 97 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ZNF879B4DU55 563 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 C3orf80F5H4A9 247 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ADAM20O43506 726 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SPRY1O43609 319 aaPredicted RBP11.05□□□□□ -0.64
CTSA-213ENST00000606782 FCN3O75636 299 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 GPX5O75715 221 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SC5DO75845 299 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ALX3O95076 343 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 NRASP01111 189 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SMIM18P0DKX4 95 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 PRDX4Q13162 271 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SSX1Q16384 188 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 FAM76BQ5HYJ3 339 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ZNF826PQ6ZT77 177 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 WDR86Q86TI4 376 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 SERPINA12Q8IW75 414 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 OR13C3Q8NGS6 347 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 MUL1Q969V5 352 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ITPKCQ96DU7 683 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 TLNRD1Q9H1K6 362 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 ABCB9Q9NP78 766 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 DHDHQ9UQ10 334 aa11.05□□□□□ -0.64
CTSA-213ENST00000606782 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 TRBV5-7A0A0A0MS05 114 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 POM121CA8CG34 1229 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 ECDO95905 644 aaPredicted RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 SERPINA3P01011 423 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 GRPP07492 148 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 OCM2P0CE71 109 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 MUC1P15941 1255 aaPredicted RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 GNALP38405 381 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 GP2P55259 537 aaKnown RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 IL13RA1P78552 427 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 TRAM1Q15629 374 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 UBE2V2Q15819 145 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 NEDD8Q15843 81 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 CEACAM21Q3KPI0 293 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 Q499Y3 187 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 ACSM3Q53FZ2 586 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 GPR157Q5UAW9 335 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 ZNF529Q6P280 563 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 C16orf87Q6PH81 154 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 TMEM91Q6ZNR0 172 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 MOB3CQ70IA8 216 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 BOLLQ8N9W6 283 aaKnown RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 OR1M1Q8NGA1 313 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 OR5A2Q8NGI9 324 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 OR5D14Q8NGL3 314 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 OR13C5Q8NGS8 318 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 HIST1H2AAQ96QV6 131 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 PAPOLGQ9BWT3 736 aaKnown RBP11.04□□□□□ -0.64
CTSA-213ENST00000606782 SMURF1Q9HCE7 757 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 NOX4Q9NPH5 578 aa11.04□□□□□ -0.64
CTSA-213ENST00000606782 ANKRD61A6NGH8 418 aa11.03□□□□□ -0.64
CTSA-213ENST00000606782 A6NLC8 198 aa11.03□□□□□ -0.64
CTSA-213ENST00000606782 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
CTSA-213ENST00000606782 CCRL2O00421 344 aa11.03□□□□□ -0.64
CTSA-213ENST00000606782 TMPRSS2O15393 492 aa11.03□□□□□ -0.64
CTSA-213ENST00000606782 PIN1P1O15428 100 aa11.03□□□□□ -0.64
CTSA-213ENST00000606782 GATBO75879 557 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms