RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZNF20P17024 532 aa18.6■□□□□ 0.57
CCDC9-204ENST00000599398 PRDX2P32119 198 aa18.6■□□□□ 0.57
CCDC9-204ENST00000599398 CEBPDP49716 269 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-204ENST00000599398 RAB40BQ12829 278 aa18.6■□□□□ 0.57
CCDC9-204ENST00000599398 IL24Q13007 206 aa18.6■□□□□ 0.57
CCDC9-204ENST00000599398 ADAT3Q96EY9 351 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-204ENST00000599398 TNFRSF19Q9NS68 423 aa18.6■□□□□ 0.57
CCDC9-204ENST00000599398 CLDN34H7C241 214 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 ISG15P05161 165 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 RNASE1P07998 156 aaKnown RBP18.59■□□□□ 0.57
CCDC9-204ENST00000599398 COMPP49747 757 aaPredicted RBP18.59■□□□□ 0.57
CCDC9-204ENST00000599398 CCR9P51686 369 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 ALKBH1Q13686 389 aaKnown RBP18.59■□□□□ 0.57
CCDC9-204ENST00000599398 RCN1Q15293 331 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 FAM185AQ8N0U4 392 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 ZNF676Q8N7Q3 588 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 C3orf56Q8N813 242 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 APH1BQ8WW43 257 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 FGGYQ96C11 551 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 ISG20L2Q9H9L3 353 aaKnown RBP18.59■□□□□ 0.57
CCDC9-204ENST00000599398 INPP5EQ9NRR6 644 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 ERVK13-1Q9NX77 482 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 HHLA2Q9UM44 414 aa18.59■□□□□ 0.57
CCDC9-204ENST00000599398 IGKV1-27A0A075B6S5 117 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 IGHA1P01876 353 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 OCM2P0CE71 109 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 OCMP0CE72 109 aaPredicted RBP18.58■□□□□ 0.56
CCDC9-204ENST00000599398 PRB3Q04118 309 aaPredicted RBP18.58■□□□□ 0.56
CCDC9-204ENST00000599398 KLHL22Q53GT1 634 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 LPCAT4Q643R3 524 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 SYS1Q8N2H4 156 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 ZNF561Q8N587 486 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 OR52I1Q8NGK6 324 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 OR13C3Q8NGS6 347 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 CYGBQ8WWM9 190 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 SLAMF9Q96A28 289 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 HES4Q9HCC6 221 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 NOX4Q9NPH5 578 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 FBN3Q75N90 2809 aa18.58■□□□□ 0.56
CCDC9-204ENST00000599398 TRBV23-1A0A0A0MS06 115 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 HKR1P10072 659 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 CFPP27918 469 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 ATP1B3P54709 279 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 DLX1P56177 255 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 BLMHQ13867 455 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 SMN1Q16637 294 aaKnown RBP18.57■□□□□ 0.56
CCDC9-204ENST00000599398 SLC25A26Q70HW3 274 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 Q8N7P7 452 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 OR51A4Q8NGJ6 313 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 OR10AC1Q8NH08 325 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 CEP19Q96LK0 163 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 PRDM13Q9H4Q3 707 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 MTCH1Q9NZJ7 389 aa18.57■□□□□ 0.56
CCDC9-204ENST00000599398 OR4C45A6NMZ5 311 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 CLIC3O95833 236 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 ATF1P18846 271 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 PEX2P28328 305 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 RBP2P50120 134 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 ERVK11-1P61568 191 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 AWAT1Q58HT5 328 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 Q6YL49 198 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 UTS2BQ765I0 119 aa18.56■□□□□ 0.56
CCDC9-204ENST00000599398 MRPS18AQ9NVS2 196 aaKnown RBP18.56■□□□□ 0.56
CCDC9-204ENST00000599398 IGKV1-9A0A0C4DH69 117 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 A0A0U1RQK1 487 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 A0A1W2PRD5 423 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 A0A1W2PRF3 423 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 A0A1W2PRM7 423 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 ANKRD65E5RJM6 399 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 H0YAE9 185 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 M0R1W7 72 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 WBP4O75554 376 aaKnown RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 KNG1P01042 644 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 MELTFP08582 738 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 PRKACBP22694 351 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 EEF1B2P24534 225 aaKnown RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 AZGP1P25311 298 aaKnown RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 POU3F4P49335 361 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 GBX2P52951 348 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 MTCP1P56278 107 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 GUCA2AQ02747 115 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 FOXL1Q12952 345 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 KLRD1Q13241 179 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 C16orf87Q6PH81 154 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 METAP1DQ6UB28 335 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 EGFL6Q8IUX8 553 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 DNAAF1Q8NEP3 725 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 CNIH3Q8TBE1 160 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 METTL8Q9H825 291 aaKnown RBP18.55■□□□□ 0.56
CCDC9-204ENST00000599398 C8orf4Q9NR00 106 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 C19orf12Q9NSK7 152 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 FAM96BQ9Y3D0 163 aa18.55■□□□□ 0.56
CCDC9-204ENST00000599398 F8VVB4 439 aa18.54■□□□□ 0.56
CCDC9-204ENST00000599398 F8VWA3 439 aa18.54■□□□□ 0.56
CCDC9-204ENST00000599398 RNASEK-C17orf49H0YIS7 233 aa18.54■□□□□ 0.56
CCDC9-204ENST00000599398 CYB5AP00167 134 aa18.54■□□□□ 0.56
CCDC9-204ENST00000599398 RPL31P62899 125 aaKnown RBP18.54■□□□□ 0.56
CCDC9-204ENST00000599398 MRPL28Q13084 256 aaKnown RBP18.54■□□□□ 0.56
CCDC9-204ENST00000599398 ZNF691Q5VV52 312 aa18.54■□□□□ 0.56
CCDC9-204ENST00000599398 TTC23Q5W5X9 447 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms