RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 EDDM3BP56851 147 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 DYNC1I2Q13409 638 aaKnown RBP8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 LCN1P1Q5VSP4 162 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 PIGWQ7Z7B1 504 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 ZNF679Q8IYX0 411 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 ASCC1Q8N9N2 400 aaKnown RBP8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 ASB17Q8WXJ9 295 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 FOXRED1Q96CU9 486 aaPredicted RBP8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 MALSU1Q96EH3 234 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 OR8B4Q96RC9 309 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 CDCA4Q9BXL8 241 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 AURKAIP1Q9NWT8 199 aaPredicted RBP8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 COPS3Q9UNS2 423 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 TMEM14AQ9Y6G1 99 aa8.53□□□□□ -1.04
CHMP2A-202ENST00000596708 A6NDX4 124 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 A6NIN4 97 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 PRR32B1ATL7 298 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 LOC110117498-PIK3R3F6TDL0 507 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 NOS1APO75052 506 aaPredicted RBP8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 INMTO95050 263 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 IGLV3-1P01715 115 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 TTRP02766 147 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 ANXA8P13928 327 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 CD33P20138 364 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 PRKACGP22612 351 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 OR12D2P58182 307 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 ACTR3P61158 418 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 CBX1P83916 185 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 COL10A1Q03692 680 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 ANGPTL5Q86XS5 388 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 HS3ST5Q8IZT8 346 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 Q8N2B8 174 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 TRMT10AQ8TBZ6 339 aaKnown RBP8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 PHF21AQ96BD5 680 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 CCDC124Q96CT7 223 aaKnown RBP8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 ASB9Q96DX5 294 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 NUFIP1Q9UHK0 495 aaKnown RBP8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 SLC22A13Q9Y226 551 aa8.52□□□□□ -1.05
CHMP2A-202ENST00000596708 FAM230AA0A1W2PPH8 454 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 PQLC2LA1A4F0 135 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 CCDC182A6NF36 153 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 H3BUI4 141 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 K7N7A8 449 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 F2RL2O00254 374 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 DLGAP1O14490 977 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 MAGEB4O15481 346 aaPredicted RBP8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 CHRM2P08172 466 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 ZNF728P0DKX0 622 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 IGHV1-8P0DP01 117 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 VDAC2P45880 294 aaPredicted RBP8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 GYS2P54840 703 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 DLX6P56179 175 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 BLCAPP62952 87 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 ROM1Q03395 351 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 SLC34A1Q06495 639 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 MFGE8Q08431 387 aaPredicted RBP8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 BCL2L15Q5TBC7 163 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 FOXB2Q5VYV0 432 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 ZNF626Q68DY1 528 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 Q6ZS46 218 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 GDPD3Q7L5L3 318 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 ADGRG5Q8IZF4 528 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 CANT1Q8WVQ1 401 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 APOL4Q9BPW4 351 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 NRIP2Q9BQI9 281 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 SLC25A19Q9HC21 320 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 HES4Q9HCC6 221 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 H2AFY2Q9P0M6 372 aaPredicted RBP8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 OR52A1Q9UKL2 312 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 SLC7A11Q9UPY5 501 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 HILPDAQ9Y5L2 63 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 V9GYS6 101 aa8.51□□□□□ -1.05
CHMP2A-202ENST00000596708 ADARB2-AS1A8MUL3 147 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ODF3BA8MYP8 253 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ATP8B1O43520 1251 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 MPIG6BO95866 241 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ALDOBP05062 364 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 PF4V1P10720 104 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 IGLL1P15814 213 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 CALB2P22676 271 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 CRISP1P54107 249 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 CXCR4P61073 352 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ACTA2P62736 377 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ACTG2P63267 376 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ACTC1P68032 377 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ACTA1P68133 377 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 IL24Q13007 206 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 TMEM95Q3KNT9 176 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 LDLRAD2Q5SZI1 272 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 TMEM42Q69YG0 159 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ZNF322Q6U7Q0 402 aaPredicted RBP8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 PLEKHG7Q6ZR37 379 aa8.5□□□□□ -1.05
CHMP2A-202ENST00000596708 ELMOD2Q8IZ81 293 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms