RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TSPAN5P62079 268 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 PMP22Q01453 160 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 DHODHQ02127 395 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 FGL1Q08830 312 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 P2RY6Q15077 328 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 GABRA6Q16445 453 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 SRSF7Q16629 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS25-203ENST00000589520 CHRFAM7AQ494W8 412 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 ATPAF1Q5TC12 328 aaPredicted RBP8.97□□□□□ -0.97
VPS25-203ENST00000589520 C11orf88Q6PI97 169 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 FBXW12Q6X9E4 464 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 C3P1Q6ZMU1 363 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 ZNF573Q86YE8 665 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 GVQW1Q8N7I0 195 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 FAM169BQ8N8A8 192 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 TMEM185AQ8NFB2 350 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 OR4S1Q8NGB4 309 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 OR5AP2Q8NGF4 316 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 OR56B2PQ8NGI1 322 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 OR2T35Q8NGX2 323 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 FBXW5Q969U6 566 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 ZNF75AQ96N20 296 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 CDH20Q9HBT6 801 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 SHPKQ9UHJ6 478 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 ELF5Q9UKW6 265 aaPredicted RBP8.97□□□□□ -0.97
VPS25-203ENST00000589520 STARD10Q9Y365 291 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
VPS25-203ENST00000589520 MED13Q9UHV7 2174 aa8.96□□□□□ -0.97
VPS25-203ENST00000589520 IGKV1-27A0A075B6S5 117 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MBD3L4A6NDZ8 208 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 MBD3L3A6NE82 208 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 MBD3L5A6NJ08 208 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 HMSDA8MTL9 139 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 F5H5P2 479 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MKRN2OSH3BPM6 223 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 KLK10O43240 276 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 SLC22A5O76082 557 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 PMP2P02689 132 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 COX5AP20674 150 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 FUT3P21217 361 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 IGHV1-2P23083 117 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 KIR2DL2P43627 348 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 PRDX4Q13162 271 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 NKPD1Q17RQ9 610 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MICBQ29980 383 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 ACSF3Q4G176 576 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 TMEM128Q5BJH2 165 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 TMEM211Q6ICI0 200 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 BEND4Q6ZU67 534 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 LYG2Q86SG7 212 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MDP1Q86V88 176 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MUC20Q8N307 709 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 C9orf62Q8N4C0 152 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 OR10K1Q8NGX5 313 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 MBD3L2Q8NHZ7 208 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 EMG1Q92979 244 aaKnown RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 GPR137Q96N19 417 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 PHB2Q99623 299 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 PAPOLGQ9BWT3 736 aaKnown RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 PKIBQ9C010 78 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 PPA2Q9H2U2 334 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.98
VPS25-203ENST00000589520 SPACA1Q9HBV2 294 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 PROCRQ9UNN8 238 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 GPR132Q9UNW8 380 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 HSPB11Q9Y547 144 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 CNTRLQ7Z7A1 2325 aa8.96□□□□□ -0.98
VPS25-203ENST00000589520 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 SPRY1O43609 319 aaPredicted RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 PDCD6O75340 191 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 RAD51DO75771 328 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 DUS4LO95620 317 aaKnown RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 RAC2P15153 192 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 ZNF14P17017 642 aaPredicted RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 GABRR1P24046 479 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 ZBTB25P24278 435 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 CHATP28329 748 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 CD34P28906 385 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 GNG3P63215 75 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 IL13RA1P78552 427 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 CYCSP99999 105 aaKnown RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 TAF9Q16594 264 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 MPV17LQ2QL34 196 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 HIKESHIQ53FT3 197 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 LAMTOR1Q6IAA8 161 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 OR52W1Q6IF63 320 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 OVCH2Q7RTZ1 564 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 TMED4Q7Z7H5 227 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 PEG10Q86TG7 708 aaKnown RBP8.95□□□□□ -0.98
VPS25-203ENST00000589520 LHFPL1Q86WI0 220 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 ZNF611Q8N823 705 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 UXS1Q8NBZ7 420 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 MITD1Q8WV92 249 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 OR5P3Q8WZ94 311 aa8.95□□□□□ -0.98
VPS25-203ENST00000589520 GTF3AQ92664 365 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms