RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 Q6ZSV7 163 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 MBOAT2Q6ZWT7 520 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 HIST2H3AQ71DI3 136 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TSEN54Q7Z6J9 526 aaKnown RBP4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TIGD4Q8IY51 512 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 OFCC1Q8IZS5 231 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 LRRC75AQ8NAA5 344 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 BEND2Q8NDZ0 799 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TMEM185AQ8NFB2 350 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 OR4S1Q8NGB4 309 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 SPTSSAQ969W0 71 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TLCD1Q96CP7 247 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TBX15Q96SF7 602 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 PITX2Q99697 317 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 NSRP1Q9H0G5 558 aaKnown RBP4.57□□□□□ -1.68
DNMT1-220ENST00000589351 SIRPDQ9H106 197 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 SYT4Q9H2B2 425 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 VCX2Q9H322 139 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 TOR3AQ9H497 397 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 ANKRD19PQ9H560 264 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 RANGRFQ9HD47 186 aaPredicted RBP4.57□□□□□ -1.68
DNMT1-220ENST00000589351 RAB18Q9NP72 206 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 ONECUT1Q9UBC0 465 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 VPREB3Q9UKI3 123 aa4.57□□□□□ -1.68
DNMT1-220ENST00000589351 FAM32AQ9Y421 112 aaKnown RBP4.57□□□□□ -1.68
DNMT1-220ENST00000589351 A0A087WUU8 490 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 BBIP1A8MTZ0 92 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 E9PI62 339 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 BHLHE40O14503 412 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 SOCS2O14508 198 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 IMPA2O14732 288 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 GYPAP02724 150 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 ZNF823P16415 610 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 PAICSP22234 425 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 RBMXP38159 391 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 DDOSTP39656 456 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 CAPGP40121 348 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 KIR2DS4P43632 304 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 YAP1P46937 504 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 PCP4P48539 62 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 GZMMP51124 257 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 LOXL3P58215 753 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 TAF13Q15543 124 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 MPPED2Q15777 294 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 SNCBQ16143 134 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 BEAN1Q3B7T3 259 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 IFI44LQ53G44 452 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 LBHQ53QV2 105 aaPredicted RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 LRRC10Q5BKY1 277 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 COQ5Q5HYK3 327 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 CLEC12AQ5QGZ9 265 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 PRAMEF6Q5VXH4 476 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 SLC35E4Q6ICL7 350 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 TEX38Q6PEX7 206 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 DPY19L2P2Q6ZN68 376 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 FAM122BQ7Z309 247 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 VMO1Q7Z5L0 202 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 RTN4RL2Q86UN3 420 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 CALHM3Q86XJ0 350 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 PDZD9Q8IXQ8 264 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 C19orf18Q8NEA5 215 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR2T12Q8NG77 320 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR4C15Q8NGM1 316 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR4C13Q8NGP0 309 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR8S1Q8NH09 359 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR2T6Q8NHC8 308 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 MRAPQ8TCY5 172 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 MED30Q96HR3 178 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 SSX3Q99909 188 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 ATF6BQ99941 703 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 ADAT1Q9BUB4 502 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 SP140LQ9H930 580 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 WDR76Q9H967 626 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 RNPEPL1Q9HAU8 725 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 INTS9Q9NV88 658 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 C1orf123Q9NWV4 160 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 OR6C3Q9NZP0 311 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 ZNRD1Q9P1U0 126 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 KIAA1456Q9P272 454 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 RHCGQ9UBD6 479 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 KAAG1Q9UBP8 84 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 KCNG2Q9UJ96 466 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 RPUSD1Q9UJJ7 312 aaKnown RBP4.56□□□□□ -1.68
DNMT1-220ENST00000589351 IER3IP1Q9Y5U9 82 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 LHFPL6Q9Y693 200 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 COX11Q9Y6N1 276 aa4.56□□□□□ -1.68
DNMT1-220ENST00000589351 TRRAPQ9Y4A5 3859 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 TET2Q6N021 2002 aaPredicted RBP4.55□□□□□ -1.68
DNMT1-220ENST00000589351 A0A0G2JND7 137 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 MEIOCA2RUB1 952 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 UNC119BA6NIH7 251 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 ANKRD30BLA7E2S9 258 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 CD300LBA8K4G0 201 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 FAM220BPB1ANY3 271 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 G3V4G9 280 aa4.55□□□□□ -1.68
DNMT1-220ENST00000589351 M0R135 149 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms