RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SEBOXQ9HB31 216 aaPredicted RBP8.38□□□□□ -1.07
TPM4-207ENST00000588032 HES4Q9HCC6 221 aa8.38□□□□□ -1.07
TPM4-207ENST00000588032 SMURF1Q9HCE7 757 aa8.38□□□□□ -1.07
TPM4-207ENST00000588032 SCN3BQ9NY72 215 aa8.38□□□□□ -1.07
TPM4-207ENST00000588032 SLC25A10Q9UBX3 287 aaPredicted RBP8.38□□□□□ -1.07
TPM4-207ENST00000588032 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
TPM4-207ENST00000588032 NUP50Q9UKX7 468 aa8.38□□□□□ -1.07
TPM4-207ENST00000588032 ZANQ9Y493 2812 aa8.38□□□□□ -1.07
TPM4-207ENST00000588032 SETD2Q9BYW2 2564 aaPredicted RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 SONP18583 2426 aaKnown RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 IGKV1D-17A0A075B6S4 117 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 IGKV1-9A0A0C4DH69 117 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 RFPL4AA6NLU0 287 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 RFPL4AL1F8VTS6 287 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 SLC1A7O00341 560 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 XPNPEP2O43895 674 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 KNG1P01042 644 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 AZGP1P25311 298 aaKnown RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 PRDX2P32119 198 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 GTF2A1P52655 376 aaPredicted RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 IKZF1Q13422 519 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 C6orf141Q5SZD1 244 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 FIP1L1Q6UN15 594 aaKnown RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 SLC25A26Q70HW3 274 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 CMTM4Q8IZR5 234 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 BPIFB2Q8N4F0 458 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 FAM216BQ8N7L0 139 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 LY6G5BQ8NDX9 201 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 OR51A4Q8NGJ6 313 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 OR10AC1Q8NH08 325 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 C8orf46Q8TAG6 207 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 NPRL2Q8WTW4 380 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 TSEN15Q8WW01 171 aaKnown RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 GATAD2BQ8WXI9 593 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 MYDGFQ969H8 173 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 SMIM19Q96E16 107 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 CPNE2Q96FN4 548 aaPredicted RBP8.37□□□□□ -1.07
TPM4-207ENST00000588032 CEP19Q96LK0 163 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 OPALINQ96PE5 141 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 GAFA1Q96PS6 74 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 SUCNR1Q9BXA5 334 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 RHOFQ9HBH0 211 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 FKBP14Q9NWM8 211 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 MTCH1Q9NZJ7 389 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 CLEC2DQ9UHP7 191 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 ZNF222Q9UK12 451 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 ERGIC3Q9Y282 383 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 ZNF281Q9Y2X9 895 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 PCDHGB5Q9Y5G0 923 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 KPTNQ9Y664 436 aa8.37□□□□□ -1.07
TPM4-207ENST00000588032 IGKV1-27A0A075B6S5 117 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 MYL12BO14950 172 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 MAGEB3O15480 346 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 SULT1B1O43704 296 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 TOX4O94842 621 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 CDK1P06493 297 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 RAB3AP20336 220 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 MYF6P23409 242 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 C21orf33P30042 268 aaPredicted RBP8.36□□□□□ -1.07
TPM4-207ENST00000588032 WNT4P56705 351 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 FGF12P61328 243 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 PDZK1IP1Q13113 114 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 PDCD1Q15116 288 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 DGUOKQ16854 277 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 KLF17Q5JT82 389 aaPredicted RBP8.36□□□□□ -1.07
TPM4-207ENST00000588032 DMKNQ6E0U4 476 aaPredicted RBP8.36□□□□□ -1.07
TPM4-207ENST00000588032 C1orf122Q6ZSJ8 110 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 SAXO1Q8IYX7 474 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 NANOGP1Q8N7R0 232 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
TPM4-207ENST00000588032 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 OR13C9Q8NGT0 318 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 TBC1D15Q8TC07 691 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 ZNF488Q96MN9 340 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 WDFY2Q96P53 400 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 DCTN5Q9BTE1 182 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 ANKRD60Q9BZ19 345 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 MS4A7Q9GZW8 240 aaPredicted RBP8.36□□□□□ -1.07
TPM4-207ENST00000588032 FAM234AQ9H0X4 552 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 GLS2Q9UI32 602 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 MAB21L2Q9Y586 359 aa8.36□□□□□ -1.07
TPM4-207ENST00000588032 TRBV23-1A0A0A0MS06 115 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 A0A1B0GW55 424 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 A0A1W2PPH5 198 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 PTGES3LE9PB15 166 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 FCN3O75636 299 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 ATP6V1G2O95670 118 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 PLATP00750 562 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 CD1AP06126 327 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 CHRM2P08172 466 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 HCKP08631 526 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
TPM4-207ENST00000588032 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms