RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 H3BSH0 61 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 SFTPBP07988 381 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 TDGF1P13385 188 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 HLA-DOBP13765 273 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 FABP4P15090 132 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 IL2RGP31785 369 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 TMEM33P57088 247 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 ZP4Q12836 540 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 MEP1BQ16820 701 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 MS4A18Q3C1V0 323 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC35D2Q76EJ3 337 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 ZNF101Q8IZC7 436 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 NAT6Q93015 286 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 C8orf44Q96CB5 159 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 PRRX2Q99811 253 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 TUBD1Q9UJT1 453 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 HHLA2Q9UM44 414 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 RHBDD3Q9Y3P4 386 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 PUS1Q9Y606 427 aaKnown RBP eCLIP12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 TMEM269A0A1B0GVZ9 245 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 ZFAND5O76080 213 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 P2RY1P47900 373 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 SUPT4H1P63272 117 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 FOXF1Q12946 379 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 HYAL4Q2M3T9 481 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 ASB10Q8WXI3 467 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 OCIAD1Q9NX40 245 aa12.26□□□□□ -0.45
RABGGTA-220ENST00000560998 DCDC2BA2VCK2 349 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 A6NIZ1 184 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 MARCH11A6NNE9 402 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 ETV2O00321 342 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 MBP02144 154 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 OR13C7P0DN81 318 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 RAP1BP61224 184 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 GGNBP1Q5YKI7 109 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 FAM219AQ8IW50 185 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 ZNF248Q8NDW4 579 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 OR13C3Q8NGS6 347 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 MAFAQ8NHW3 353 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 C1orf123Q9NWV4 160 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 MYOTQ9UBF9 498 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 PITPNC1Q9UKF7 332 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC22A13Q9Y226 551 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 VDAC3Q9Y277 283 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CACNA1CQ13936 2221 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CFIP05156 583 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 ISG15P05161 165 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CHRM2P08172 466 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CXCL1P09341 107 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 PTGDSP41222 190 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CLDN6P56747 220 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 IFI44Q8TCB0 444 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 NKD1Q969G9 470 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 DDIT4LQ96D03 193 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 GUCD1Q96NT3 240 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 DDA1Q9BW61 102 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 CHST11Q9NPF2 352 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 KLRF1Q9NZS2 232 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 GSKIPQ9P0R6 139 aa12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 C19orf25Q9UFG5 118 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 COA3Q9Y2R0 106 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-220ENST00000560998 FREM3P0C091 2139 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 A0A0C4DFX4 3053 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 IGLV3-32A0A0A0MS00 114 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 NPIPB13A6NJU9 1138 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 B4DEV8 164 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 SHISA8B8ZZ34 492 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 NPIPB4C9JG80 1138 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 NPIPA5E9PKD4 350 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 H3BQ15 152 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 PNPP00491 289 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 PDGFBP01127 241 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 FGF5P12034 268 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 MSX1P28360 303 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 HSD11B1P28845 292 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 GLIPR1P48060 266 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 DAP3P51398 398 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 UBE2KP61086 200 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 GLO1Q04760 184 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 SPEM2Q0P670 501 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 FAM69BQ5VUD6 431 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 MRPL14Q6P1L8 145 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms