RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SPNP16150 400 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 BCL3P20749 454 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 NPBWR2P48146 333 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ACTBP60709 375 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ACTG1P63261 375 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 IGFBP7Q16270 282 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 MSMPQ1L6U9 139 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ELP2Q6IA86 826 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 CCBE1Q6UXH8 406 aaPredicted RBP16.56■□□□□ 0.24
SKP2-208ENST00000546211 LRP11Q86VZ4 500 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 Q8NFD4 153 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 OR10AD1Q8NGE0 317 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ARHGAP5-AS1Q96IT6 56 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 SYT3Q9BQG1 590 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 MSL2Q9HCI7 577 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 MTCH1Q9NZJ7 389 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ST3GAL6Q9Y274 331 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 POLDIP2Q9Y2S7 368 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 ATP23Q9Y6H3 246 aa16.56■□□□□ 0.24
SKP2-208ENST00000546211 hCG_2014768A0A024R1R8 64 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 IGLV3-9A0A075B6K5 115 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PLSCR5A0PG75 271 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 FOXI3A8MTJ6 420 aaPredicted RBP16.55■□□□□ 0.24
SKP2-208ENST00000546211 SYNGR1O43759 233 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 SSX4O60224 188 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 CSF1P09603 554 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 GNG2P59768 71 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 CDSNQ15517 529 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 TAF9Q16594 264 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PNLIPRP3Q17RR3 467 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PCGF3Q3KNV8 242 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PLAC9Q5JTB6 97 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 Q6ZR03 302 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 WDR86Q86TI4 376 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 POM121Q96HA1 1249 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 CA10Q9NS85 328 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 POU2F3Q9UKI9 436 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 ELF5Q9UKW6 265 aaPredicted RBP16.55■□□□□ 0.24
SKP2-208ENST00000546211 FAM240BA0A1B0GVZ2 78 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 A0A1B0GWJ7 208 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 MEIS3P1A6NDR6 274 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 MFNGO00587 321 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 GRPP07492 148 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 GRNP28799 593 aaKnown RBP16.55■□□□□ 0.24
SKP2-208ENST00000546211 RBM11P57052 281 aaKnown RBP16.55■□□□□ 0.24
SKP2-208ENST00000546211 FGF12P61328 243 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 ZNF154Q13106 437 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PIGYQ3MUY2 71 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 NCMAPQ5T1S8 102 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 TRAPPC6BQ86SZ2 158 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 BATF2Q8N1L9 274 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 SCCPDHQ8NBX0 429 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 LINC01560Q8TB33 94 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 PECRQ9BY49 303 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 ZNF442Q9H7R0 627 aa16.55■□□□□ 0.24
SKP2-208ENST00000546211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.55■□□□□ 0.24
SKP2-208ENST00000546211 TPRP12270 2363 aaKnown RBP16.54■□□□□ 0.24
SKP2-208ENST00000546211 PRR14LQ5THK1 2151 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 F5H5P2 479 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 GEMIN2O14893 280 aaKnown RBP16.54■□□□□ 0.24
SKP2-208ENST00000546211 SNTB1Q13884 538 aaKnown RBP16.54■□□□□ 0.24
SKP2-208ENST00000546211 DEDD2Q8WXF8 326 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 MRPL24Q96A35 216 aaKnown RBP16.54■□□□□ 0.24
SKP2-208ENST00000546211 NEDD4LQ96PU5 975 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 MRPL37Q9BZE1 423 aaKnown RBP16.54■□□□□ 0.24
SKP2-208ENST00000546211 PLK3Q9H4B4 646 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 RHOFQ9HBH0 211 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 PLEKHJ1Q9NW61 149 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
SKP2-208ENST00000546211 NAP1L6A6NFF2 107 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 TUBAL3A6NHL2 446 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 SERPINE3A8MV23 424 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 VSTM5A8MXK1 200 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 FAUP35544 74 aaKnown RBP16.53■□□□□ 0.24
SKP2-208ENST00000546211 ARFRP1Q13795 201 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 NHLRC3Q5JS37 347 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 NKAPLQ5M9Q1 402 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 ADAM5Q6NVV9 412 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 Q8IYB0 196 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 ZNF808Q8N4W9 903 aaPredicted RBP16.53■□□□□ 0.24
SKP2-208ENST00000546211 OR2Z1Q8NG97 314 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 NUDCD2Q8WVJ2 157 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 PLPPR2Q96GM1 343 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 HSF4Q9ULV5 492 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 KCNK7Q9Y2U2 307 aa16.53■□□□□ 0.24
SKP2-208ENST00000546211 HEATR1Q9H583 2144 aaKnown RBP16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A10PA6NDY2 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A18PA6NE21 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A16PA6NEW6 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A20PA6NIJ5 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A8PA6NJQ4 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A7PA6NKC0 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A22PA8MWA6 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A12PA8MX19 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A5PA8MXJ8 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 FAM90A23PA8MXZ1 464 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 PRSS44E7EML9 344 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 CDIPTO14735 213 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 RHBDL1O75783 438 aa16.52■□□□□ 0.24
SKP2-208ENST00000546211 MT-ND4P03905 459 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms