RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CDX2Q99626 313 aaPredicted RBP4.53□□□□□ -1.68
UBE4A-203ENST00000545354 SRSF8Q9BRL6 282 aaKnown RBP4.53□□□□□ -1.68
UBE4A-203ENST00000545354 DUSP16Q9BY84 665 aa4.53□□□□□ -1.68
UBE4A-203ENST00000545354 NDUFB11Q9NX14 153 aa4.53□□□□□ -1.68
UBE4A-203ENST00000545354 B4GALT7Q9UBV7 327 aa4.53□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
UBE4A-203ENST00000545354 FBXW11Q9UKB1 542 aa4.53□□□□□ -1.68
UBE4A-203ENST00000545354 COQ4Q9Y3A0 265 aa4.53□□□□□ -1.68
UBE4A-203ENST00000545354 A0A087WX48 190 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 KLF18A0A0U1RQI7 1052 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CCDC195A0A1B0GUA6 201 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 A0A1B0GX51 115 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 A0A1W2PQF6 199 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 IRGMA1A4Y4 181 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZNF840PA6NDX5 716 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FAM181BA6NEQ2 426 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SHISA7A6NL88 538 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 E9PQ18 207 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 GAPDHSO14556 408 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 NBR2O15453 112 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 NKX2-8O15522 239 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CDRT1O95170 752 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SOX14O95416 240 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 IGLC1P0CG04 106 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 GYG1P46976 350 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PRLHRP49683 370 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CAMPP49913 170 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZNF266Q14584 549 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 P2RY6Q15077 328 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ELAVL1Q15717 326 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZIC1Q15915 447 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 TMEM211Q6ICI0 200 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FOXI2Q6ZQN5 318 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 Q6ZTK2 550 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ADGRE4PQ86SQ3 457 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 LRP11Q86VZ4 500 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 TMEM25Q86YD3 366 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZADH2Q8N4Q0 377 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SUMF2Q8NBJ7 301 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 GLIS3Q8NEA6 775 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CNIH3Q8TBE1 160 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 GPR148Q8TDV2 347 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 NUDT8Q8WV74 236 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PP6455Q8WZ26 134 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 APOBEC3DQ96AK3 386 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SCARF2Q96GP6 870 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ADTRPQ96IZ2 230 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 MS4A10Q96PG2 267 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 NDFIP1Q9BT67 221 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 LRRC61Q9BV99 259 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 C1QTNF4Q9BXJ3 329 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PBX4Q9BYU1 374 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SMIM3Q9BZL3 60 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CHIAQ9BZP6 476 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 SLC35B3Q9H1N7 401 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 TCEAL2Q9H3H9 227 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FNDC4Q9H6D8 234 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CALHM2Q9HA72 323 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ELOVL3Q9HB03 270 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ALKBH4Q9NXW9 302 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PLEKHB1Q9UF11 243 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 RCE1Q9Y256 329 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CFAP20Q9Y6A4 193 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZNF816-ZNF321PA0A0X1KG74 233 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PRSS37A4D1T9 235 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 B5MCH6 92 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 F8VVB4 439 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 F8VWA3 439 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PIRO00625 290 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PLPP3O14495 311 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 TAAR5O14804 337 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 GSTZ1O43708 216 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 OR1F1O43749 312 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CD5LO43866 347 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 MT-CO3P00414 261 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 IFNW1P05000 195 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 UNGP13051 313 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 COX7A2P14406 83 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CD33P20138 364 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FCARP24071 287 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 TIA1P31483 386 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 FAUP35544 74 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CRYBB2P43320 205 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 CX3CR1P49238 355 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 UFM1P61960 85 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 RPS23P62266 143 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ENDOGQ14249 297 aaKnown RBP4.52□□□□□ -1.69
UBE4A-203ENST00000545354 PDGFRLQ15198 375 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 MMDQ15546 238 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 OR8B8Q15620 311 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ALG10Q5BKT4 473 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 Q6ZN92 141 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 APRG1Q8IVJ8 170 aa4.52□□□□□ -1.69
UBE4A-203ENST00000545354 ZNF485Q8NCK3 441 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms