RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RFKQ969G6 155 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 GABARAPL3Q9BY60 117 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 GPR173Q9NS66 373 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 OAZ3Q9UMX2 235 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 SF3B6Q9Y3B4 125 aaKnown RBP13.24□□□□□ -0.29
DDX55-212ENST00000544738 hCG_1809904A0A1W2PP81 198 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PPE2 198 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PQL4 384 aaPredicted RBP13.23□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PR64 198 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PRV1 198 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 MEIOCA2RUB1 952 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 METTL15A6NJ78 407 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 SYNGR1O43759 233 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
DDX55-212ENST00000544738 NXPH2O95156 264 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 OPN1MWP04001 364 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 CCL1P22362 96 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 MPZP25189 248 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 PRDX2P32119 198 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 CDC42P60953 191 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 KLRD1Q13241 179 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 PLEKHG7Q6ZR37 379 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 FAM185AQ8N0U4 392 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 CD177Q8N6Q3 437 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 ZSCAN4Q8NAM6 433 aaPredicted RBP13.23□□□□□ -0.29
DDX55-212ENST00000544738 TBX5Q99593 518 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 NRIP2Q9BQI9 281 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 ADI1Q9BV57 179 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 SEMA6AQ9H2E6 1030 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 PLEKHA1Q9HB21 404 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 ELL3Q9HB65 397 aaPredicted RBP13.23□□□□□ -0.29
DDX55-212ENST00000544738 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 SLC7A11Q9UPY5 501 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 SLC22A13Q9Y226 551 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PRD5 423 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PRF3 423 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PRM7 423 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 ANKRD61A6NGH8 418 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 POLR2IP36954 125 aaKnown RBP13.22□□□□□ -0.29
DDX55-212ENST00000544738 TGFBR2P37173 567 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 DLX1P56177 255 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 RPL31P62899 125 aaKnown RBP13.22□□□□□ -0.29
DDX55-212ENST00000544738 IL24Q13007 206 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 SSX6Q7RTT6 188 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 CATSPERDQ86XM0 798 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 OR10H4Q8NGA5 316 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 SGCDQ92629 289 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 ZNF488Q96MN9 340 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 PKIBQ9C010 78 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 RIBC2Q9H4K1 309 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 HEXA-AS1Q9H8Q6 139 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 PLXNB1O43157 2135 aa13.22□□□□□ -0.29
DDX55-212ENST00000544738 SYT7O43581 403 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 SERPINA3P01011 423 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 PRB3Q04118 309 aaPredicted RBP13.21□□□□□ -0.29
DDX55-212ENST00000544738 DHRS7BQ6IAN0 325 aaPredicted RBP13.21□□□□□ -0.29
DDX55-212ENST00000544738 Q6ZSV7 163 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 CALHM1Q8IU99 346 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 BEND2Q8NDZ0 799 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 TRUB1Q8WWH5 349 aaKnown RBP13.21□□□□□ -0.29
DDX55-212ENST00000544738 RORBQ92753 470 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 FAM234AQ9H0X4 552 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 C16orf95Q9H693 158 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 HES4Q9HCC6 221 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 C19orf12Q9NSK7 152 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 USE1Q9NZ43 259 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
DDX55-212ENST00000544738 DNAH3Q8TD57 4116 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 FAM230AA0A1W2PPH8 454 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 A6NIN4 97 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 ANGPTL7O43827 346 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 GATBO75879 557 aaKnown RBP13.2□□□□□ -0.3
DDX55-212ENST00000544738 FUT6P51993 359 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 ERVK11-1P61568 191 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 ODF4Q2M2E3 257 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 FAM220AQ7Z4H9 259 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 KCTD20Q7Z5Y7 419 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 ANGPTL5Q86XS5 388 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 PNKDQ8N490 385 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 EME1Q96AY2 570 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 OR14J1Q9UGF5 321 aa13.2□□□□□ -0.3
DDX55-212ENST00000544738 SAC3D1A6NKF1 404 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 TSPAN9O75954 239 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 APOL3O95236 402 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 TK1P04183 234 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
DDX55-212ENST00000544738 TMEM200BQ69YZ2 307 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 HCP5Q6MZN7 132 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 MKXQ8IYA7 352 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 TRMT10AQ8TBZ6 339 aaKnown RBP13.19□□□□□ -0.3
DDX55-212ENST00000544738 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms