RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TMEM65Q6PI78 240 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 OR13G1Q8NGZ3 307 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 OR1F12Q8NHA8 337 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 STARD4Q96DR4 205 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 MS4A3Q96HJ5 214 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PKIBQ9C010 78 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 RBM38Q9H0Z9 239 aaKnown RBP8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PRRT4C9JH25 899 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PRKNO60260 465 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-208ENST00000538570 ETHE1O95571 254 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM241Q24JQ0 296 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 FAM27D1Q5T7N8 215 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 LPAR5Q9H1C0 372 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 CYSLTR2Q9NS75 346 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 LOXHD1Q8IVV2 1947 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 NDUFB6O95139 128 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 OR5AL1P0C617 328 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 AWAT1Q58HT5 328 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 OR10V1Q8NGI7 309 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 SNX22Q96L94 193 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 ZNF430Q9H8G1 570 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-208ENST00000538570 CHD4Q14839 1912 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 A0A1W2PN81 502 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 NPY1RP25929 384 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 CHRNA7P36544 502 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 GNG4P50150 75 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 ASCL1P50553 236 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 CEACAM16Q2WEN9 425 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 SPATA46Q5T0L3 261 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 XAF1Q6GPH4 301 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 STPG2Q8N412 459 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 FOXB1Q99853 325 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 ADAT1Q9BUB4 502 aaKnown RBP8.9□□□□□ -0.98
COL4A6-208ENST00000538570 A0A0A6YYD5 115 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 KRASP01116 189 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 RPEL1Q2QD12 228 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 DEFB109BQ30KR1 87 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 C12orf73Q69YU5 71 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 OR2J1Q9GZK6 312 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 HRASP01112 189 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 MYOGP15173 224 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 OPRK1P41145 380 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 CALHM3Q86XJ0 350 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 CCL4L1Q8NHW4 92 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 LINC00615Q96LM1 132 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-208ENST00000538570 RAB40CQ96S21 281 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 SARGQ9BW04 601 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 GHITMQ9H3K2 345 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 DOK5Q9P104 306 aa8.9□□□□□ -0.98
COL4A6-208ENST00000538570 GEMIN2O14893 280 aaKnown RBP8.9□□□□□ -0.99
COL4A6-208ENST00000538570 ADAM20O43506 726 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 SPRY3O43610 288 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 PDE6DO43924 150 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 AESQ08117 197 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 SLC38A11Q08AI6 406 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 GSG1Q2KHT4 349 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 C1orf185Q5T7R7 199 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 B3GNTL1Q67FW5 361 aaPredicted RBP8.9□□□□□ -0.99
COL4A6-208ENST00000538570 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 TNFRSF12AQ9NP84 129 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 SLC45A2Q9UMX9 530 aa8.9□□□□□ -0.99
COL4A6-208ENST00000538570 CEACAM6P40199 344 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ERVS71-1P61550 626 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 NEIL1Q96FI4 390 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TBX15Q96SF7 602 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 P4HTMQ9NXG6 502 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ONECUT1Q9UBC0 465 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF256Q9Y2P7 627 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TRGV8A0A0C4DH27 118 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM272A0A1B0GTI8 110 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 SFT2D2O95562 160 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 FGF2P09038 288 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 GNG3P63215 75 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 FUT7Q11130 342 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 SP6Q3SY56 376 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 FAM169BQ8N8A8 192 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 PRSS3P2Q8NHM4 247 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TNFSF15O95150 251 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 IGLV3-27P01718 113 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TNFRSF1AP19438 455 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 EPHA2P29317 976 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 DMRTC1Q5HYR2 192 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 LYPD8Q6UX82 237 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 FBXL14Q8N1E6 418 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 SPICQ8N5J4 248 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 OR1L4Q8NGR5 311 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 VN1R17PQ8TDU5 208 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 PTP4A1Q93096 173 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 DOK1Q99704 481 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ICAM5Q9UMF0 924 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TRBV5-4A0A0C4DH59 114 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 WNT1P04628 370 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 CNRIP1Q96F85 164 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ALKBH3Q96Q83 286 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 SEC11CQ9BY50 192 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 GSN-AS1Q9NRJ2 163 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 TAAR3PQ9P1P4 343 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms