RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NATD1Q8N6N6 113 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 C5orf56Q8N8D9 126 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 RNF152Q8N8N0 203 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 PSMA8Q8TAA3 256 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 PYROXD1Q8WU10 500 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 DNAJA4Q8WW22 397 aaPredicted RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 ITFG2Q969R8 447 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 FLYWCH2Q96CP2 140 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 C17orf77Q96MU5 243 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 RBP7Q96R05 134 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 NDEL1Q9GZM8 345 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 WFDC10AQ9H1F0 79 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 WDR13Q9H1Z4 485 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 SLC38A1Q9H2H9 487 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 C12orf10Q9HB07 376 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 PLEKHA1Q9HB21 404 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 MID1IP1Q9NPA3 183 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 LZTFL1Q9NQ48 299 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 STX18Q9P2W9 335 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 DPM3Q9P2X0 92 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 MARCOQ9UEW3 520 aaPredicted RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 A4GNTQ9UNA3 340 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 TNCP24821 2201 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 IGHV4-4A0A075B6R2 117 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 IGHV4OR15-8A0A075B7B6 117 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 A0A087WW49 117 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 LOC102724200A0A096LPH7 203 aaPredicted RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 IGKV1D-43A0A0B4J1Z2 117 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 A0A1B0GWA3 101 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 RPS10-NUDT3A0A1W2PQS6 291 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 TCRBV9S1A1TA0A576 114 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 OR6C6A6NF89 314 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 FAM183AA6NL82 134 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 OR2AT4A6NND4 320 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 A8MT66 165 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 LEUTXA8MZ59 168 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CENPBD1B2RD01 187 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 TMEM114B3SHH9 223 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 BHLHE40O14503 412 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 FMO6PO60774 539 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 KRT36O76013 467 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 PTBP3O95758 552 aaKnown RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 CH25HO95992 272 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 MT-ATP6P00846 226 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 IGHG4P01861 327 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 LCATP04180 440 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CD7P09564 240 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZNF728P0DKX0 622 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 OR5H8P0DN80 308 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CPA3P15088 417 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 NCK1P16333 377 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CTRB1P17538 263 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 BGNP21810 368 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 PSMB8P28062 276 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 SERPINB5P36952 375 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CEACAM3P40198 252 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 SERPINB8P50452 374 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 TIRAPP58753 221 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 NCALDP61601 193 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CSNK2BP67870 215 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 RUNX1Q01196 453 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 BDH1Q02338 343 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ENDOGQ14249 297 aaKnown RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZNF273Q14593 569 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 KIAA0040Q15053 153 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 GUCA2BQ16661 112 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 DEFB135Q30KP9 77 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 UNC50Q53HI1 259 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ARMC4Q5T2S8 1044 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CTRB2Q6GPI1 263 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CCDC144NLQ6NUI1 221 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ULK3Q6PHR2 472 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 WDR82Q6UXN9 313 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 C3orf62Q6ZUJ4 267 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZNF767PQ75MW2 155 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CCDC80Q76M96 950 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 NANOGNBQ7Z5D8 188 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 LINC00596Q86U02 117 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 LRRC34Q8IZ02 419 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CLECL1Q8IZS7 167 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZNF676Q8N7Q3 588 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CCNYL1Q8N7R7 359 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZNF491Q8N8L2 437 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 OR1M1Q8NGA1 313 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ANGPTL6Q8NI99 470 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 RCN3Q96D15 328 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 METTL2AQ96IZ6 378 aaKnown RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 KCTD7Q96MP8 289 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 RAB3IPQ96QF0 476 aaPredicted RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZBTB18Q99592 522 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 CLEC7AQ9BXN2 247 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 MRPL13Q9BYD1 178 aaKnown RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 BARHL1Q9BZE3 327 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 DPH5Q9H2P9 285 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 YY1AP1Q9H869 796 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 FAM212BQ9NTI7 297 aaPredicted RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 TAS2R5Q9NYW4 299 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 ZIM2Q9NZV7 527 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms