RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OR2T27Q8NH04 317 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 PPP1R35Q8TAP8 253 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 IL4I1Q96RQ9 567 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 GABARAPL1Q9H0R8 117 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 USE1Q9NZ43 259 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 OR14J1Q9UGF5 321 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 KRT8P05787 483 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 CCL3L1P16619 93 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 PAX6P26367 422 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 BMXP51813 675 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 ERVK11-1P61568 191 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 IL24Q13007 206 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 ZNF273Q14593 569 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 LY6EQ16553 131 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 CRIP3Q6Q6R5 217 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 ANGPTL5Q86XS5 388 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 CALHM1Q8IU99 346 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 BATF2Q8N1L9 274 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 OR4C13Q8NGP0 309 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 PKIBQ9C010 78 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-207ENST00000531727 RAB18Q9NP72 206 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
CPSF1-207ENST00000531727 ENOPH1Q9UHY7 261 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 SLC22A13Q9Y226 551 aa13.67□□□□□ -0.22
CPSF1-207ENST00000531727 TET2Q6N021 2002 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-207ENST00000531727 RPP14O95059 124 aaKnown RBP13.66□□□□□ -0.22
CPSF1-207ENST00000531727 COX7A1P24310 79 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 KIR2DS4P43632 304 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 EFNB2P52799 333 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 ERVFRD-1P60508 538 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 C11orf88Q6PI97 169 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 CATSPERDQ86XM0 798 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 ZDHHC13Q8IUH4 622 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 YIPF7Q8N8F6 280 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 FAM110DQ8TAY7 271 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-207ENST00000531727 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
CPSF1-207ENST00000531727 TBX5Q99593 518 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 PLEKHA1Q9HB21 404 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 SIGLEC9Q9Y336 463 aa13.66□□□□□ -0.22
CPSF1-207ENST00000531727 FAM230AA0A1W2PPH8 454 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 K7N7A8 449 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 CSF1P09603 554 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 OR2T7P0C7T2 308 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 FASP25445 335 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 HTR1FP30939 366 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 LGALS4P56470 323 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 Q6ZTK2 550 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 CIB1Q99828 191 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 SLC7A11Q9UPY5 501 aa13.65□□□□□ -0.22
CPSF1-207ENST00000531727 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 A0A1W2PQL4 384 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-207ENST00000531727 METTL15A6NJ78 407 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 C17orf98A8MV24 154 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 CHRM2P08172 466 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 PIPP12273 146 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-207ENST00000531727 DLX6P56179 175 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 COL10A1Q03692 680 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 BNIP1Q12981 228 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 UBE2V2Q15819 145 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF782Q6ZMW2 699 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-207ENST00000531727 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 ASCC1Q8N9N2 400 aaKnown RBP13.64□□□□□ -0.23
CPSF1-207ENST00000531727 OR2T6Q8NHC8 308 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 PIFOQ8TCI5 191 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 CEP19Q96LK0 163 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
CPSF1-207ENST00000531727 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
CPSF1-207ENST00000531727 IGKV1-27A0A075B6S5 117 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 F8VVB4 439 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 F8VWA3 439 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 H3BSH0 61 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 SYT7O43581 403 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 CHST1O43916 411 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF737O75373 536 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 GATBO75879 557 aaKnown RBP13.63□□□□□ -0.23
CPSF1-207ENST00000531727 SULT1C4O75897 302 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 RBP4P02753 201 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 FCGR1AP12314 374 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 FUT6P51993 359 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 LHFPL4Q7Z7J7 247 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 DTX3Q8N9I9 347 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 CCDC54Q8NEL0 328 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 OR10H4Q8NGA5 316 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 NPFFR1Q9GZQ6 430 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 CHST5Q9GZS9 411 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 MTCH1Q9NZJ7 389 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 FOXJ3Q9UPW0 622 aa13.63□□□□□ -0.23
CPSF1-207ENST00000531727 TGP01266 2768 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 MEGF11A6BM72 1044 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 VGLL3A8MV65 326 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 APOL3O95236 402 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms