RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 NMBRP28336 390 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 MPGP29372 298 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 GALR1P47211 349 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 PPP1CBP62140 327 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 HSPB3Q12988 150 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 IL13RA2Q14627 380 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 EXOSC7Q15024 291 aaKnown RBP6.16□□□□□ -1.42
LIN7C-202ENST00000524596 ZNF79Q15937 498 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 HLA-DRB5Q30154 266 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 FAM174BQ3ZCQ3 159 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 TMEM97Q5BJF2 176 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 CTU1Q7Z7A3 348 aaKnown RBP6.16□□□□□ -1.42
LIN7C-202ENST00000524596 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.16□□□□□ -1.42
LIN7C-202ENST00000524596 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.16□□□□□ -1.42
LIN7C-202ENST00000524596 HSH2DQ96JZ2 352 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 ZNF331Q9NQX6 463 aaPredicted RBP6.16□□□□□ -1.42
LIN7C-202ENST00000524596 TMEM106BQ9NUM4 274 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 DMAC2Q9NW81 257 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
LIN7C-202ENST00000524596 DENND4BO75064 1496 aaPredicted RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 KIR2DL5BA0A0G2JN68 375 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 KIR2DL5BA0A0G2JPC4 375 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 A0A1W2PP11 408 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 A0A1W2PQF6 199 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 PPIHO43447 177 aaKnown RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 XRCC3O43542 346 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 ZNF253O75346 499 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 SP9P0CG40 484 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 ZNF728P0DKX0 622 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 ELNP15502 786 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 LGALS7P47929 136 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 MPV17LQ2QL34 196 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 OR10J3Q5JRS4 329 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 PHYKPLQ8IUZ5 450 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 C1orf210Q8IVY1 113 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 KIR2DL5AQ8N109 375 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 OR5D14Q8NGL3 314 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 GLYATL1Q969I3 302 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 SMIM19Q96E16 107 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 RBMXL1Q96E39 390 aaKnown RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 ORAI2Q96SN7 254 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 BEX4Q9NWD9 120 aaPredicted RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 HCFC2Q9Y5Z7 792 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 CITO14578 2027 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 CDHR4A6H8M9 788 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 LRRC30A6NM36 301 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 B4DGG1 531 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 WIPF1O43516 503 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 NEURL1O76050 574 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 FCGR2BP31994 310 aaPredicted RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 RRADP55042 308 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 ZNF626Q68DY1 528 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 B3GALNT2Q8NCR0 500 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 KREMEN2Q8NCW0 462 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 FEZF2Q8TBJ5 459 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 WFDC12Q8WWY7 111 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 FLYWCH2Q96CP2 140 aaKnown RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 DNAJC30Q96LL9 226 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 MRPL45Q9BRJ2 306 aaKnown RBP6.15□□□□□ -1.42
LIN7C-202ENST00000524596 OR51I1Q9H343 314 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 OXSMQ9NWU1 459 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 HRASLS2Q9NWW9 162 aa6.15□□□□□ -1.42
LIN7C-202ENST00000524596 TRAV36DV7A0A075B6V5 113 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 FAM24AA6NFZ4 105 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 C17orf112F2Z3M2 114 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 BCL6P41182 706 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 CCR2P41597 374 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 WNT3P56703 355 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 ABHD17BQ5VST6 288 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 IRF2BP2Q7Z5L9 587 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 SLC35E3Q7Z769 313 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 APOBEC3FQ8IUX4 373 aaKnown RBP6.15□□□□□ -1.43
LIN7C-202ENST00000524596 COX18Q8N8Q8 333 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 OR5K2Q8NHB8 316 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 WNT2BQ93097 391 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 ANKRD10Q9NXR5 420 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 PCTPQ9UKL6 214 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 ICAM5Q9UMF0 924 aa6.15□□□□□ -1.43
LIN7C-202ENST00000524596 NIP7Q9Y221 180 aaKnown RBP eCLIP6.15□□□□□ -1.43
LIN7C-202ENST00000524596 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 GPR25O00155 361 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 SYNGR1O43759 233 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 EVI2AP22794 236 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 FUT6P51993 359 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 FXYD6P3P58550 94 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 FABP5Q01469 135 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 COX20Q5RI15 118 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 ZNF880Q6PDB4 577 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 GPSM1Q86YR5 675 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 GPR135Q8IZ08 494 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 RNF183Q96D59 192 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 MS4A6EQ96DS6 147 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 SEC22AQ96IW7 307 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 SIGLEC12Q96PQ1 595 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 NDFIP1Q9BT67 221 aa6.14□□□□□ -1.43
LIN7C-202ENST00000524596 SSBP3Q9BWW4 388 aaPredicted RBP6.14□□□□□ -1.43
LIN7C-202ENST00000524596 WDR61Q9GZS3 305 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms