RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ATMQ13315 3056 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
GPC1-209ENST00000495100 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ZNF695Q8IW36 515 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 MITD1Q8WV92 249 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 PECRQ9BY49 303 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 FZR1Q9UM11 496 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 NOSIPQ9Y314 301 aaKnown RBP11.78□□□□□ -0.52
GPC1-209ENST00000495100 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 CFAP47Q6ZTR5 3102 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 A0A1W2PQD3 144 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 SSSCA1O60232 199 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 ICAM2P13598 275 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 MSX1P28360 303 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 NHLH2Q02577 135 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 ZNF273Q14593 569 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 IGSF11Q5DX21 431 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 SVBPQ8N300 66 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 FAM131CQ96AQ9 280 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 SCGB3A2Q96PL1 93 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 CCNL2Q96S94 520 aaPredicted RBP11.77□□□□□ -0.52
GPC1-209ENST00000495100 SRXN1Q9BYN0 137 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 LUZP4Q9P127 313 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 LRFN1Q9P244 771 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 RABL2AQ9UBK7 228 aaPredicted RBP11.77□□□□□ -0.52
GPC1-209ENST00000495100 RABL2BQ9UNT1 228 aa11.77□□□□□ -0.52
GPC1-209ENST00000495100 B3GALNT1O75752 331 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 GLAP06280 429 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 CELA3AP09093 270 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 TUBG1P23258 451 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 NPBWR2P48146 333 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 RBP2P50120 134 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 TMEM33P57088 247 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
GPC1-209ENST00000495100 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 OR10D3Q8NH80 312 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 NPTNQ9Y639 398 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 CYCSP99999 105 aaKnown RBP11.77□□□□□ -0.53
GPC1-209ENST00000495100 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
GPC1-209ENST00000495100 MALLQ13021 153 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 DTX1Q86Y01 620 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 AQP3Q92482 292 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 DUSP23Q9BVJ7 150 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
GPC1-209ENST00000495100 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 FOXG1P55316 489 aaPredicted RBP11.76□□□□□ -0.53
GPC1-209ENST00000495100 GNMTQ14749 295 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 ATP1A1-AS1Q5TC04 95 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 CADM4Q8NFZ8 388 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 NELFAQ9H3P2 528 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 RASL12Q9NYN1 266 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 ATRXP46100 2492 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 HPP00738 406 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 PEA15Q15121 130 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 PABPC1L2AQ5JQF8 200 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 ABHD17BQ5VST6 288 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 CNEP1R1Q8N9A8 125 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 NAT6Q93015 286 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 BSCL2Q96G97 398 aaPredicted RBP11.76□□□□□ -0.53
GPC1-209ENST00000495100 ZC3H10Q96K80 434 aaKnown RBP11.76□□□□□ -0.53
GPC1-209ENST00000495100 HS3ST3B1Q9Y662 390 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 SCGNO76038 276 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 GP1BAP07359 652 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 GRPP07492 148 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 TAS2R31P59538 309 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
GPC1-209ENST00000495100 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 OR8U1Q8NH10 309 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 TTC9Q92623 222 aa11.76□□□□□ -0.53
GPC1-209ENST00000495100 DHRS3O75911 302 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 SFT2D2O95562 160 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 P2RY4P51582 365 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 TAS2R46P59540 309 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 MIDNQ504T8 468 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 FOXB1Q99853 325 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 REG4Q9BYZ8 158 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 WDR1O75083 606 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 AQP8O94778 261 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 SFTA3P0C7M3 94 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 PTGER4P35408 488 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 CYB561P49447 251 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
GPC1-209ENST00000495100 ZNF92Q03936 586 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 C1orf123Q9NWV4 160 aa11.75□□□□□ -0.53
GPC1-209ENST00000495100 PPP1R3CQ9UQK1 317 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms