RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CCDC134Q9H6E4 229 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 FAM206AQ9NX38 181 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 PIGLQ9Y2B2 252 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 IGHV2-26A0A0B4J1V2 119 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 JUNBP17275 347 aaPredicted RBP14.11□□□□□ -0.15
NUP50-218ENST00000493456 MAGEA2P43356 314 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 EDDM3BP56851 147 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 ACTA2P62736 377 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 ACTG2P63267 376 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 ACTC1P68032 377 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 ACTA1P68133 377 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 GDPD3Q7L5L3 318 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 KRT77Q7Z794 578 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 OR51D1Q8NGF3 324 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 GPR84Q9NQS5 396 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 SLC22A13Q9Y226 551 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 SESN1Q9Y6P5 492 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 U3KQK5 164 aa14.11□□□□□ -0.15
NUP50-218ENST00000493456 TMEM269A0A1B0GVZ9 245 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 PRODHO43272 600 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 IGLV3-1P01715 115 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 MPZP25189 248 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 MEF2CQ06413 473 aaPredicted RBP14.1□□□□□ -0.15
NUP50-218ENST00000493456 MICAQ29983 383 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 DEGS2Q6QHC5 323 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 CD300LDQ6UXZ3 194 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 RNF144BQ7Z419 303 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 MRPL41Q8IXM3 137 aaKnown RBP14.1□□□□□ -0.15
NUP50-218ENST00000493456 OR51E1Q8TCB6 317 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 CHID1Q9BWS9 393 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 LAMP5Q9UJQ1 280 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.1□□□□□ -0.15
NUP50-218ENST00000493456 KLHDC2Q9Y2U9 406 aa14.1□□□□□ -0.15
NUP50-218ENST00000493456 STAB2Q8WWQ8 2551 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 EPPK1P58107 5090 aaKnown RBP14.09□□□□□ -0.15
NUP50-218ENST00000493456 PRR23D1E9PI22 279 aaPredicted RBP14.09□□□□□ -0.15
NUP50-218ENST00000493456 C3orf84H3BNL1 204 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 ZNF737O75373 536 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 DHRS3O75911 302 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 LPLP06858 475 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 CHRM2P08172 466 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 PRR23D2P0DMB1 279 aaPredicted RBP14.09□□□□□ -0.15
NUP50-218ENST00000493456 ARHGDIBP52566 201 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 ABCA11PQ4W5N1 156 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 KCTD18Q6PI47 426 aaPredicted RBP14.09□□□□□ -0.15
NUP50-218ENST00000493456 TCF23Q7RTU1 214 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 OR8H2Q8N162 312 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 IQCF1Q8N6M8 205 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 ZNF676Q8N7Q3 588 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 CLEC7AQ9BXN2 247 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 PBOV1Q9GZY1 135 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 MYLK2Q9H1R3 596 aa14.09□□□□□ -0.15
NUP50-218ENST00000493456 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
NUP50-218ENST00000493456 hADV38S2A0JD32 116 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 PQLC2LA1A4F0 135 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 MEX3AA1L020 520 aaKnown RBP14.08□□□□□ -0.16
NUP50-218ENST00000493456 H3BN98 237 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 DLGAP1O14490 977 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 OR2F2O95006 317 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 ALOX5APP20292 161 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 LMO1P25800 156 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 HTR1DP28221 377 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 BRS3P32247 399 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 ERVK11-1P61568 191 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 PPP1R8Q12972 351 aaKnown RBP14.08□□□□□ -0.16
NUP50-218ENST00000493456 KLHL22Q53GT1 634 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 SLC35D3Q5M8T2 416 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 TMEM42Q69YG0 159 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 PLBD1Q6P4A8 553 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 UNQ9370/PRO34162Q6UXP9 181 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 ETV3LQ6ZN32 361 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 PGAM4Q8N0Y7 254 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 OSR2Q8N2R0 312 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 TEAD3Q99594 435 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 SLC25A33Q9BSK2 321 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 MROQ9BYG7 248 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 PKIBQ9C010 78 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 TMEM133Q9H2Q1 129 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 DNAJB9Q9UBS3 223 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 SAMHD1Q9Y3Z3 626 aaKnown RBP14.08□□□□□ -0.16
NUP50-218ENST00000493456 LINC00312Q9Y6C7 94 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 BIRC6Q9NR09 4857 aa14.08□□□□□ -0.16
NUP50-218ENST00000493456 SLC6A1P30531 599 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 THBS3P49746 956 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 IL24Q13007 206 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 ZNF829Q3KNS6 432 aaPredicted RBP14.07□□□□□ -0.16
NUP50-218ENST00000493456 SPATS1Q496A3 300 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 C10orf99Q6UWK7 81 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 ASRGL1Q7L266 308 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 BATF2Q8N1L9 274 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 OR4P4Q8NGL7 312 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 STMN2Q93045 179 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 RBM14Q96PK6 669 aaKnown RBP14.07□□□□□ -0.16
NUP50-218ENST00000493456 NIPSNAP1Q9BPW8 284 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 ZNF649Q9BS31 505 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 REEP1Q9H902 201 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 TAS2R1Q9NYW7 299 aa14.07□□□□□ -0.16
NUP50-218ENST00000493456 NUFIP1Q9UHK0 495 aaKnown RBP14.07□□□□□ -0.16
NUP50-218ENST00000493456 U3KQV3 271 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms