RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 BDH1Q02338 343 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 GPR50Q13585 617 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 TPTE2P1Q5T6R2 138 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 CBLL1Q75N03 491 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 GDPD3Q7L5L3 318 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 TPRX1Q8N7U7 411 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 FANK1Q8TC84 345 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 NRIP2Q9BQI9 281 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 IFT27Q9BW83 186 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 KRCC1Q9NPI7 259 aaPredicted RBP10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 DHRS12A0PJE2 317 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 ARRDC5A6NEK1 342 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 A8MZ25 164 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF593O00488 134 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF737O75373 536 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 NXPH2O95156 264 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM106CPP0CH98 169 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 CNTFRP26992 372 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 FOXE3Q13461 319 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 EDDM3AQ14507 147 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 CEACAM21Q3KPI0 293 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 SLC35F1Q5T1Q4 408 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 RNF152Q8N8N0 203 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 DCUN1D4Q92564 292 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 CCDC28BQ9BUN5 200 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 OR52D1Q9H346 318 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
EXOSC3-207ENST00000490516 hADV38S2A0JD32 116 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 IGLV1-47P01700 117 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 OR8U8P0C7N1 319 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 SLC6A6P31641 620 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 CBX1P83916 185 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 MEF2CQ06413 473 aaPredicted RBP10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 HNF4GQ14541 408 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 PRAMEF5Q5TYX0 476 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 ERICH5Q6P6B1 374 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF596Q8TC21 504 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A18PA6NE21 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A16PA6NEW6 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A20PA6NIJ5 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A9PA6NNJ1 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A12PA8MX19 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A5PA8MXJ8 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 LY6LH3BQJ8 138 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 PSMD9O00233 223 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 OVOL1O14753 267 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 ELANEP08246 267 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A15PP0C7V4 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A13PP0C7W8 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A14PP0C7W9 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM90A24PP0C7X0 464 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 MNDAP41218 407 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 HES1Q14469 280 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 TNFAIP8L3Q5GJ75 292 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FGD3Q5JSP0 725 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM53AQ6NSI3 398 aaPredicted RBP10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 OR6Q1Q8NGQ2 317 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 OR56B4Q8NH76 319 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 TRMT10AQ8TBZ6 339 aaKnown RBP10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 ANKRD19PQ9H560 264 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 LINC00312Q9Y6C7 94 aa10.6□□□□□ -0.71
EXOSC3-207ENST00000490516 TRBV4-1A0A0J9YWV2 114 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 TMEM120BA0PK00 339 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 AP4M1O00189 453 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 FGF16O43320 207 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 SERPINA1P01009 418 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 APOC1P02654 83 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 TMEM11P17152 192 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 FSTP19883 344 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 CEACAM3P40198 252 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF616Q08AN1 781 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 MOB3CQ70IA8 216 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 RTN4RL2Q86UN3 420 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 LYPD6Q86Y78 171 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 THNSL2Q86YJ6 484 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 SGPP2Q8IWX5 399 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 OR5B12Q96R08 314 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 AMELYQ99218 206 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 VIPAS39Q9H9C1 493 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 GNB4Q9HAV0 340 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 ZNF286AQ9HBT8 521 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
EXOSC3-207ENST00000490516 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
EXOSC3-207ENST00000490516 OR5B21A6NL26 309 aa10.58□□□□□ -0.72
EXOSC3-207ENST00000490516 NOS1APO75052 506 aaPredicted RBP10.58□□□□□ -0.72
EXOSC3-207ENST00000490516 DEDDO75618 318 aa10.58□□□□□ -0.72
EXOSC3-207ENST00000490516 ZNF682O95780 498 aa10.58□□□□□ -0.72
EXOSC3-207ENST00000490516 GYPBP06028 91 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms