RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 OR52N1Q8NH53 320 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 RGP1Q92546 391 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 GGHQ92820 318 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 SPSB1Q96BD6 273 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 MDFIQ99750 246 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 SLC6A7Q99884 636 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 HES4Q9HCC6 221 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 RASL12Q9NYN1 266 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 SLC25A10Q9UBX3 287 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 CLEC2DQ9UHP7 191 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 RPUSD1Q9UJJ7 312 aaKnown RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 DHDHQ9UQ10 334 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF879B4DU55 563 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 GPR37O15354 613 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 LALBAP00709 142 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 RPSAP08865 295 aaKnown RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 OCM2P0CE71 109 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 OCMP0CE72 109 aaPredicted RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 ATF1P18846 271 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 POU3F4P49335 361 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 CEBPDP49716 269 aaPredicted RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 KRTAP24-1Q3LI83 254 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 TMEM185AQ8NFB2 350 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 BPIFB6Q8NFQ5 453 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 C22orf15Q8WYQ4 148 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 SLAMF9Q96A28 289 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 SMIM19Q96E16 107 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 SDSLQ96GA7 329 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 CEP19Q96LK0 163 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 PLCXD1Q9NUJ7 323 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 CHCHD3Q9NX63 227 aaKnown RBP10.67□□□□□ -0.7
COL5A1-206ENST00000465877 PSORS1C1Q9UIG5 152 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 NUP50Q9UKX7 468 aa10.67□□□□□ -0.7
COL5A1-206ENST00000465877 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 RNF212BA8MTL3 300 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SLC1A7O00341 560 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 MYL12BO14950 172 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 LIPFP07098 398 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SFTPBP07988 381 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ACAA1P09110 424 aaPredicted RBP10.66□□□□□ -0.7
COL5A1-206ENST00000465877 MMP9P14780 707 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 PRKACBP22694 351 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ATP1B3P54709 279 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 CAV3P56539 151 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ERVK11-1P61568 191 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 METTL11BQ5VVY1 283 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 IZUMO2Q6UXV1 221 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SLC25A26Q70HW3 274 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 STX19Q8N4C7 294 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ZNRF1Q8ND25 227 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 GATAD2BQ8WXI9 593 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 RFT1Q96AA3 541 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 MED30Q96HR3 178 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SPACA5Q96QH8 159 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 PCGF1Q9BSM1 259 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 DCTN5Q9BTE1 182 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SUCNR1Q9BXA5 334 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ZCCHC4Q9H5U6 513 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ELL3Q9HB65 397 aaPredicted RBP10.66□□□□□ -0.7
COL5A1-206ENST00000465877 FKBP14Q9NWM8 211 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF69Q9UC07 566 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 OR14J1Q9UGF5 321 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 MAB21L2Q9Y586 359 aa10.66□□□□□ -0.7
COL5A1-206ENST00000465877 RFPL4AA6NLU0 287 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 RFPL4AL1F8VTS6 287 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 F8VVB4 439 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 F8VWA3 439 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 SPRY1O43609 319 aaPredicted RBP10.65□□□□□ -0.7
COL5A1-206ENST00000465877 SULT1B1O43704 296 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 TOX4O94842 621 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 ATP6V1G2O95670 118 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 CYB5AP00167 134 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 KNG1P01042 644 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 MT-ND2P03891 347 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 HCKP08631 526 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 NDUFB7P17568 137 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 C21orf33P30042 268 aaPredicted RBP10.65□□□□□ -0.7
COL5A1-206ENST00000465877 SOX2P48431 317 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 CAPZA1P52907 286 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 MTCP1P56278 107 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 HILS1P60008 231 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 USP43Q70EL4 1123 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 PHC2Q8IXK0 858 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 Q8IYB0 196 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 CD177Q8N6Q3 437 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 ZFP41Q8N8Y5 198 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF485Q8NCK3 441 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 LY6G5BQ8NDX9 201 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 GPR148Q8TDV2 347 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms