RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 INSIG2Q9Y5U4 225 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 E9PI62 339 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 TMPRSS2O15393 492 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 OGG1O15527 345 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 AKR7A2O43488 359 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 RHBDL1O75783 438 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 CD1AP06126 327 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 CDK1P06493 297 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 ATF1P18846 271 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 AZGP1P25311 298 aaKnown RBP9.87□□□□□ -0.83
VPS52-213ENST00000461743 SRP14P37108 136 aaKnown RBP9.87□□□□□ -0.83
VPS52-213ENST00000461743 RBMXP38159 391 aaKnown RBP9.87□□□□□ -0.83
VPS52-213ENST00000461743 DMKNQ6E0U4 476 aaPredicted RBP9.87□□□□□ -0.83
VPS52-213ENST00000461743 FAHD2BQ6P2I3 314 aaPredicted RBP9.87□□□□□ -0.83
VPS52-213ENST00000461743 LYPD2Q6UXB3 125 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 SERPINA12Q8IW75 414 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 OR51A4Q8NGJ6 313 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 OR5D14Q8NGL3 314 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 OR10AC1Q8NH08 325 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 ANGPTL6Q8NI99 470 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 FGGYQ96C11 551 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 FAHD2AQ96GK7 314 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 CNBD2Q96M20 576 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 OPALINQ96PE5 141 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 PDCD1LG2Q9BQ51 273 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 NRIP2Q9BQI9 281 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 CDCA4Q9BXL8 241 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 HES4Q9HCC6 221 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 PALMDQ9NP74 551 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 CLEC2DQ9UHP7 191 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 ZNF281Q9Y2X9 895 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 PCDHGB5Q9Y5G0 923 aa9.87□□□□□ -0.83
VPS52-213ENST00000461743 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 FAM230AA0A1W2PPH8 454 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 A6NIN4 97 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 TRIM64CA6NLI5 447 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 OR2AT4A6NND4 320 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 TRAPPC2LH3BP13 241 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 H3BSH0 61 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 SIGLEC5O15389 551 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 PHF1O43189 567 aaPredicted RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 SULT1B1O43704 296 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 CYB5AP00167 134 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 LIPFP07098 398 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 OCM2P0CE71 109 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 OCMP0CE72 109 aaPredicted RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 CAV3P56539 151 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 ERVK11-1P61568 191 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 SLC35A2P78381 396 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 IL13RA1P78552 427 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 ACSM1Q08AH1 577 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 YIF1BQ5BJH7 314 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 LRRC10Q5BKY1 277 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 FIP1L1Q6UN15 594 aaKnown RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 ACP7Q6ZNF0 438 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 ZNF788Q6ZQV5 615 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 CALHM1Q8IU99 346 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 MKXQ8IYA7 352 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 PNLDC1Q8NA58 520 aaKnown RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 TSPAN14Q8NG11 270 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 TRMT10AQ8TBZ6 339 aaKnown RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 RAB40AQ8WXH6 277 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 MED30Q96HR3 178 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 NUDT16L1Q9BRJ7 211 aaKnown RBP9.86□□□□□ -0.83
VPS52-213ENST00000461743 WDR13Q9H1Z4 485 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 RHOFQ9HBH0 211 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 ZNF222Q9UK12 451 aa9.86□□□□□ -0.83
VPS52-213ENST00000461743 IGKV1-27A0A075B6S5 117 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 LOC105371242A0A075B767 164 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 IGKV1-9A0A0C4DH69 117 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 KIR2DS1A0A191URI9 304 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 DVL1O14640 695 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 NDUFB3O43676 98 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 SYNGR1O43759 233 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 NXPH2O95156 264 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 LALBAP00709 142 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 KNG1P01042 644 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 FSHBP01225 129 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 C21orf33P30042 268 aaPredicted RBP9.85□□□□□ -0.83
VPS52-213ENST00000461743 HOXA4Q00056 320 aaPredicted RBP9.85□□□□□ -0.83
VPS52-213ENST00000461743 PAX8Q06710 450 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 KCTD21Q4G0X4 260 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 ARMCX4Q5H9R4 360 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
VPS52-213ENST00000461743 XAF1Q6GPH4 301 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 ZNF529Q6P280 563 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 IL17RELQ6ZVW7 336 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 SAXO1Q8IYX7 474 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 NANOGP1Q8N7R0 232 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 OR13C9Q8NGT0 318 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 C8orf46Q8TAG6 207 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 NANPQ8TBE9 248 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 NPRL2Q8WTW4 380 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 GATAD2BQ8WXI9 593 aa9.85□□□□□ -0.83
VPS52-213ENST00000461743 RGP1Q92546 391 aaPredicted RBP9.85□□□□□ -0.83
VPS52-213ENST00000461743 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms