RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NOP16Q9Y3C1 178 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MAB21L2Q9Y586 359 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 KPTNQ9Y664 436 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 IGKV1D-17A0A075B6S4 117 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A1W2PQ09 198 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 MEX3AA1L020 520 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ANKRD61A6NGH8 418 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ANXA2P2A6NMY6 339 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OR2AT4A6NND4 320 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PRR32B1ATL7 298 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF732B4DXR9 585 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PRR23D1E9PI22 279 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 H3BSH0 61 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 M0QZ24 198 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 TIMM23O14925 209 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 NPFFO15130 113 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ATP8B1O43520 1251 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 DCTN3O75935 186 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CLPXO76031 633 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 INMTO95050 263 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PAHP00439 452 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CST4P01036 141 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PRB2P02812 416 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 LYNP07948 512 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 MRPL3P09001 348 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ACAA1P09110 424 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PRR23D2P0DMB1 279 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 PSG2P11465 335 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 EEF1B2P24534 225 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 DCTDP32321 178 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 SAA4P35542 130 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CEBPDP49716 269 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 RAB13P51153 203 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 BLVRAP53004 296 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 RPS7P62081 194 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CDK5Q00535 292 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 IL5RAQ01344 420 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 APOFQ13790 326 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ZIK1Q3SY52 487 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 SPATS1Q496A3 300 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 STUMQ69YW2 141 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 DHRS7BQ6IAN0 325 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 LCN8Q6JVE9 175 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 HCP5Q6MZN7 132 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 GDPGP1Q6ZNW5 385 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF788Q6ZQV5 615 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 C1orf122Q6ZSJ8 110 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 KCTD20Q7Z5Y7 419 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 LDLRAD3Q86YD5 345 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 MKXQ8IYA7 352 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ADGRG5Q8IZF4 528 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 LYG1Q8N1E2 194 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CD177Q8N6Q3 437 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 CSNK2A3Q8NEV1 391 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OR4M1Q8NGD0 313 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OR52H1Q8NGJ2 320 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OTOSQ8NHW6 89 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 HPSE2Q8WWQ2 592 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF488Q96MN9 340 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 RAB3IPQ96QF0 476 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 HIST1H2AAQ96QV6 131 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 SSX3Q99909 188 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 THTPAQ9BU02 230 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 RTL8AQ9BWD3 113 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 WDR12Q9GZL7 423 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OR51I2Q9H344 312 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 TOR3AQ9H497 397 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 OPA3Q9H6K4 179 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 C19orf12Q9NSK7 152 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 NDE1Q9NXR1 346 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 TVP23BQ9NYZ1 205 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 NLKQ9UBE8 527 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 FOXJ3Q9UPW0 622 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 LRP12Q9Y561 859 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 MPC1Q9Y5U8 109 aa3.82□□□□□ -1.8
GTF3C3-208ENST00000455546 TMEM269A0A1B0GVZ9 245 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 BTBD17A6NE02 478 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 CCDC182A6NF36 153 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 RFPL4AA6NLU0 287 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 RFPL4AL1F8VTS6 287 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 H0YAE9 185 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 H3BUX3 64 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 M0R129 80 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 SYNGR1O43759 233 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 ANGPTL7O43827 346 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 E2F6O75461 281 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 TIPRLO75663 272 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 TSPAN9O75954 239 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 APOC1P02654 83 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 FBP1P09467 338 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 ALOX5APP20292 161 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 PAICSP22234 425 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC2A5P22732 501 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 CFL1P23528 166 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 TGFBR2P37173 567 aa3.81□□□□□ -1.8
GTF3C3-208ENST00000455546 MNAT1P51948 309 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms