RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 VAX1Q5SQQ9 334 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 RGS7BPQ6MZT1 257 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-206ENST00000445265 THNSL2Q86YJ6 484 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF519Q8TB69 540 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 NLRC5Q86WI3 1866 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 A0A0U1RQK1 487 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SPINT2O43291 252 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SRD5A2P31213 254 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 RAC3P60763 192 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 WIPI1Q5MNZ9 446 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-206ENST00000445265 BRICD5Q6PL45 260 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 C20orf196Q8IYI0 205 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 KCNK7Q9Y2U2 307 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 MFSD2BA6NFX1 497 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SH2D1BO14796 132 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 TGOLN2O43493 480 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 GRPP07492 148 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 OR5AC1P0C628 307 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 GABRA2P47869 451 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 EGR4Q05215 589 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 OR5AS1Q8N127 324 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 RGP1Q92546 391 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-206ENST00000445265 KCNK17Q96T54 332 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 HOGA1Q86XE5 327 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 IP6K3Q96PC2 410 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SEC11CQ9BY50 192 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SELEP16581 610 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 ZBTB25P24278 435 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 ELLP55199 621 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-206ENST00000445265 RAB4BP61018 213 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 HNF4GQ14541 408 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 RNF212Q495C1 297 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SPANXN5Q5MJ07 72 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 LCN15Q6UWW0 184 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 OR2M3Q8NG83 312 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 RXFP4Q8TDU9 374 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 SF3B5Q9BWJ5 86 aaKnown RBP14.69□□□□□ -0.06
TCOF1-206ENST00000445265 MED9Q9NWA0 146 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 LOXL2Q9Y4K0 774 aa14.69□□□□□ -0.06
TCOF1-206ENST00000445265 TNFSF4P23510 183 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 RAB13P51153 203 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ZP1P60852 638 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 UBALD2Q8IYN6 164 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ADPRHL1Q8NDY3 354 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF501Q96CX3 271 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-206ENST00000445265 BTCP35070 178 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 TMEM123Q8N131 208 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 OR4A16Q8NH70 328 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 CHST5Q9GZS9 411 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 PPP1R3CQ9UQK1 317 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF705GA8MUZ8 300 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-206ENST00000445265 CST7O76096 145 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 PTGER4P35408 488 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 MOGAT2Q3SYC2 334 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 SMUG1Q53HV7 270 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ZPBPQ9BS86 351 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 GCM1Q9NP62 436 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 KCNIP2Q9NS61 270 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 ACTL6BO94805 426 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 LTC4SQ16873 150 aa14.68□□□□□ -0.06
TCOF1-206ENST00000445265 LYPD3O95274 346 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 AKR1C3P42330 323 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 LIMK1P53667 647 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 PLPPR5Q32ZL2 321 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 H2BFWTQ7Z2G1 175 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 OR2C3Q8N628 320 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 NANPQ8TBE9 248 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 LHX4Q969G2 390 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 HIPK2Q9H2X6 1198 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 PRR13Q9NZ81 148 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 HEATR5BQ9P2D3 2071 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 GPM6AP51674 278 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 SLC10A1Q14973 349 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 OR8G1Q15617 311 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF787Q6DD87 383 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 CYB5BO43169 146 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 KITLGP21583 273 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 AQP3Q92482 292 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 HEYLQ9NQ87 328 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-206ENST00000445265 C3orf85A0A1B0GTC6 90 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 SIRPB1O00241 398 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 ZNRF4Q8WWF5 429 aa14.67□□□□□ -0.06
TCOF1-206ENST00000445265 MSI2Q96DH6 328 aaKnown RBP14.67□□□□□ -0.06
TCOF1-206ENST00000445265 SCN5AQ14524 2016 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF727A8MUV8 499 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF705FA8MVS1 300 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF705DP0CH99 300 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF705BP0CI00 300 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-206ENST00000445265 IL11P20809 199 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 DTYMKP23919 212 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 HTD2P86397 168 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 PABPC1L2AQ5JQF8 200 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 TWSG1Q9GZX9 223 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 LPAR5Q9H1C0 372 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 ARV1Q9H2C2 271 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 PSENENQ9NZ42 101 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 TRPM7Q96QT4 1865 aa14.66□□□□□ -0.06
TCOF1-206ENST00000445265 H7BYZ3 331 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms