RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AKAP14Q86UN6 197 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 ST6GALNAC3Q8NDV1 305 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 DVL3Q92997 716 aaPredicted RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 HMX3A6NHT5 357 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 PRSS44E7EML9 344 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 H2AFB2P0C5Z0 115 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 MPV17P39210 176 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 CBX5P45973 191 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 IL24Q13007 206 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 RBMS2Q15434 407 aaKnown RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 TAF9Q16594 264 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 TMEM211Q6ICI0 200 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 MKXQ8IYA7 352 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 FBXL14Q8N1E6 418 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 GVQW1Q8N7I0 195 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 OR8S1Q8NH09 359 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 RND1Q92730 232 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 PKIBQ9C010 78 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 OR10A4Q9H209 315 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 SH3BGRL2Q9UJC5 107 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 ST3GAL6Q9Y274 331 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A10PA6NDY2 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A18PA6NE21 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A16PA6NEW6 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A20PA6NIJ5 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A7PA6NKC0 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A22PA8MWA6 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A12PA8MX19 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A5PA8MXJ8 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A23PA8MXZ1 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 PEX14O75381 377 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 RAB3DO95716 219 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A15PP0C7V4 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A13PP0C7W8 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A14PP0C7W9 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FAM90A24PP0C7X0 464 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 GABRR1P24046 479 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 CHATP28329 748 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 NPBWR2P48146 333 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 RAB25P57735 213 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 MEF2DQ14814 521 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 ALKBH6Q3KRA9 238 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 PIGYQ3MUY2 71 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 SSX8Q7RTT4 187 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 OR4S1Q8NGB4 309 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 HPS1Q92902 700 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 SNAPC3Q92966 411 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 FBXW5Q969U6 566 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 RTL8AQ9BWD3 113 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 GHITMQ9H3K2 345 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 SLC2A8Q9NY64 477 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 PURGQ9UJV8 347 aaKnown RBP12.98□□□□□ -0.33
ACTB-204ENST00000425660 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
ACTB-204ENST00000425660 C16orf97H3BN30 126 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 BOLA2-SMG1P6H3BVE0 249 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
ACTB-204ENST00000425660 FCER2P06734 321 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 ZNF735P0CB33 412 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 CA7P43166 264 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 ZNF83P51522 516 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 FGF12P61328 243 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 ZNF718Q3SXZ3 478 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 ZNF782Q6ZMW2 699 aaPredicted RBP12.97□□□□□ -0.33
ACTB-204ENST00000425660 C22orf34Q6ZV56 151 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 OR8G5Q8NG78 346 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 OR10AD1Q8NGE0 317 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 OR51S1Q8NGJ8 323 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 OR6F1Q8NGZ6 308 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 CYYR1Q96J86 154 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 MICU1Q9BPX6 476 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 TINAGL1Q9GZM7 467 aaPredicted RBP12.97□□□□□ -0.33
ACTB-204ENST00000425660 RHOFQ9HBH0 211 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 IFT46Q9NQC8 304 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 PLEKHJ1Q9NW61 149 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 CRYAAP02489 173 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 PMELP40967 661 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
ACTB-204ENST00000425660 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 ADAT1Q9BUB4 502 aaKnown RBP12.97□□□□□ -0.33
ACTB-204ENST00000425660 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
ACTB-204ENST00000425660 POLEQ07864 2286 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 ATRXP46100 2492 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 LRP5LA4QPB2 252 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 J3QT63 122 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 M0R1B8 84 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 TPD52L2O43399 206 aaKnown RBP12.96□□□□□ -0.33
ACTB-204ENST00000425660 SYNGR1O43759 233 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 PRAF2O60831 178 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms