RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MTCP1P56278 107 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 OR12D2P58182 307 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 FGF12P61328 243 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SEC61A1P61619 476 aaKnown RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 BDH1Q02338 343 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZNF91Q05481 1191 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SLC34A1Q06495 639 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 MFGE8Q08431 387 aaPredicted RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 GPR50Q13585 617 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 GPR176Q14439 515 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZNF146Q15072 292 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 UBE2V2Q15819 145 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 MIDNQ504T8 468 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 TP53I3Q53FA7 332 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 FAM201AQ5SY85 155 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 OGFRL1Q5TC84 451 aaPredicted RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 Q6YL49 198 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SSX6Q7RTT6 188 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 LHFPL3Q86UP9 236 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 PRSS35Q8N3Z0 413 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 BOLLQ8N9W6 283 aaKnown RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 CHST4Q8NCG5 386 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 PXT1Q8NFP0 134 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 OR52N1Q8NH53 320 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 GPR148Q8TDV2 347 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 PPP1R14AQ96A00 147 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 C4orf36Q96KX1 117 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SNX22Q96L94 193 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 CEP19Q96LK0 163 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 TBX5Q99593 518 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 CCL13Q99616 98 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ALG8Q9BVK2 526 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 C19orf24Q9BVV8 132 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 CDCA4Q9BXL8 241 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SIRPDQ9H106 197 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZCCHC4Q9H5U6 513 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ACOXLQ9NUZ1 547 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SCN3BQ9NY72 215 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 CTSZQ9UBR2 303 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZNF222Q9UK12 451 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SF3B6Q9Y3B4 125 aaKnown RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 SONP18583 2426 aaKnown RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 IGKV1D-17A0A075B6S4 117 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 IGHV1-69DA0A0B4J2H0 117 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 IGHV3-64DA0A0J9YX35 117 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 CENPVL3A0A0U1RRI6 287 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 LOC107986453A0A1B0GWG9 222 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 MEGF11A6BM72 1044 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 RFPL4AA6NLU0 287 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 PRR32B1ATL7 298 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 RFPL4AL1F8VTS6 287 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 K7N7A8 449 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 WBP4O75554 376 aaKnown RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 ZNF205O95201 554 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 IGHV1-69P01742 117 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 TK1P04183 234 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 FBP1P09467 338 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 HKR1P10072 659 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 AMY2BP19961 511 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 AZGP1P25311 298 aaKnown RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 PEX2P28328 305 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 GABRA2P47869 451 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 KCNJ3P48549 501 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 HSPA13P48723 471 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 PDZK1IP1Q13113 114 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 BAMBIQ13145 260 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 RCN1Q15293 331 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 KRTAP24-1Q3LI83 254 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 YIF1BQ5BJH7 314 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 KLF17Q5JT82 389 aaPredicted RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 ELP2Q6IA86 826 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 OR52W1Q6IF63 320 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 C16orf87Q6PH81 154 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 C12orf54Q6X4T0 127 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 IL17RELQ6ZVW7 336 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 FAM58AQ8N1B3 248 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 MS4A15Q8N5U1 240 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 Q8NFD4 153 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 OR52I1Q8NGK6 324 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 OR13C3Q8NGS6 347 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 RPS4Y2Q8TD47 263 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 FBLIM1Q8WUP2 373 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 SSMEM1Q8WWF3 244 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 ST8SIA4Q92187 359 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 TFAP2CQ92754 450 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 GCDHQ92947 438 aaPredicted RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 MYDGFQ969H8 173 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 ZDHHC16Q969W1 377 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 CREB3L1Q96BA8 519 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 FGGYQ96C11 551 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 MRPS24Q96EL2 167 aaKnown RBP5.28□□□□□ -1.56
USP54-202ENST00000413442 OPALINQ96PE5 141 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 GAFA1Q96PS6 74 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 ZNF649Q9BS31 505 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 PCGF1Q9BSM1 259 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 TMEM138Q9NPI0 162 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 ZNF69Q9UC07 566 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms