RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 HIST1H1CP16403 213 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 TM4SF20Q53R12 229 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 C6orf89Q6UWU4 347 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 FLYWCH2Q96CP2 140 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ADTRPQ96IZ2 230 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ABHD14AQ9BUJ0 271 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 SMCO4Q9NRQ5 59 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 TAS2R4Q9NYW5 299 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 R4GMQ9 66 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 TRAV40A0A0B4J280 105 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC16A6O15403 523 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 RPL34P49207 117 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 CBLL1Q75N03 491 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 STXBP6Q8NFX7 210 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 OR4B1Q8NGF8 309 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 MGLLQ99685 303 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 DOK1Q99704 481 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 OR2H1Q9GZK4 316 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC7A10Q9NS82 523 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 WIPI2Q9Y4P8 454 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 UBE2L6O14933 153 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 GMDSO60547 372 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 RAB9AP51151 201 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 EMX1Q04741 257 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 FAM209BQ5JX69 171 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 OR51A4Q8NGJ6 313 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 HMGCLL1Q8TB92 370 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ASIC5Q9NY37 505 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF45Q02386 682 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 FMODQ06828 376 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 PHYHD1Q5SRE7 291 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 MOB1BQ7L9L4 216 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ARL6Q9H0F7 186 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 IL19Q9UHD0 177 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 ASB4Q9Y574 426 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 TAF1LQ8IZX4 1826 aa8.08□□□□□ -1.12
LIMCH1-202ENST00000381753 LOC102723996A0A087X1L8 192 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 LOC390937A0A1W2PQ73 354 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 A0A1W2PQD3 144 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 HLXQ14774 488 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OR52N1Q8NH53 320 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC7A13Q8TCU3 470 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 B9D1Q9UPM9 204 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 TRAV20A0A0B4J274 112 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 A0A0J9YW62 118 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OR6C68A6NDL8 312 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 FGF2P09038 288 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OR3A1P47881 315 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF674Q2M3X9 581 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 CMPK2Q5EBM0 449 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF446Q9NWS9 450 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 HSPB11Q9Y547 144 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 EXOSC2Q13868 293 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OTUD1Q5VV17 481 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF691Q5VV52 312 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ADGRE4PQ86SQ3 457 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF546Q86UE3 836 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OR2L13Q8N349 312 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 METTL26Q96S19 204 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 C20orf85Q9H1P6 137 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 PLCXD1Q9NUJ7 323 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 hCG_38984A0A1B0GV85 526 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 SPI1P17947 270 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 UBE2NLQ5JXB2 153 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF529Q6P280 563 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 ACOT7LQ6ZUV0 252 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 OR1K1Q8NGR3 316 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 MMP27Q9H306 513 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 CNTD2Q9H8S5 307 aa8.07□□□□□ -1.12
LIMCH1-202ENST00000381753 PMP2P02689 132 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 IL5P05113 134 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 TAS2R19P59542 299 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 MS4A2Q01362 244 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ACVR1Q04771 509 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 LRRC56Q8IYG6 542 aaPredicted RBP8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC38A9Q8NBW4 561 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF721Q8TF20 911 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 WDR13Q9H1Z4 485 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 VSIG4Q9Y279 399 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 IGHV3-72A0A0B4J1Y9 119 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 M0QYG6 137 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 IGLV3-19P01714 112 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 MRPL19P49406 292 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF74Q16587 644 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF343Q6P1L6 599 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 PHC2Q8IXK0 858 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 LIPT2A6NK58 231 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 A6NNC1 897 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ARNTLO00327 626 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 FOXS1O43638 330 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 OR7C2O60412 319 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 DXOO77932 396 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 THY1P04216 161 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 TFAP2AP05549 437 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 HLA-GP17693 338 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 RAB5BP61020 215 aa8.06□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF679Q8IYX0 411 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms