RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 DEFB108AA8MXU0 73 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 E7EQL1 145 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 GSTZ1O43708 216 aaPredicted RBP15.8■□□□□ 0.12
CLN3-206ENST00000360019 SCGNO76038 276 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 CHRM2P08172 466 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 CD3GP09693 182 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 TMEM50BP56557 158 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 SELENOVP59797 346 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 TRIQKQ629K1 86 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 MKXQ8IYA7 352 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 SCCPDHQ8NBX0 429 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 OR2Z1Q8NG97 314 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 OR52I2Q8NH67 350 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 C15orf40Q8WUR7 153 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 NUDT16L1Q9BRJ7 211 aaKnown RBP15.8■□□□□ 0.12
CLN3-206ENST00000360019 RBFOX1Q9NWB1 397 aaKnown RBP15.8■□□□□ 0.12
CLN3-206ENST00000360019 UBR5O95071 2799 aaPredicted RBP15.8■□□□□ 0.12
CLN3-206ENST00000360019 PKDREJQ9NTG1 2253 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 PLSCR5A0PG75 271 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 GABARAPH6UMI1 98 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 PLAUP00749 431 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 CPT2P23786 658 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 LOXP28300 417 aaPredicted RBP15.8■□□□□ 0.12
CLN3-206ENST00000360019 PIGYQ3MUY2 71 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 ZNF260Q3ZCT1 412 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 PLAC9Q5JTB6 97 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 DNM1P46Q6ZS02 220 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 OSR2Q8N2R0 312 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 SPERTQ8NA61 448 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 OR56B1Q8NGI3 324 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 ZNF488Q96MN9 340 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 NKIRAS2Q9NYR9 191 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 ABCA4P78363 2273 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 C19orf84I3L1E1 186 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 CDIPTO14735 213 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 CYB5AP00167 134 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 GRPP07492 148 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 MRPS10P82664 201 aaKnown RBP15.79■□□□□ 0.12
CLN3-206ENST00000360019 SCN1BQ07699 218 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 DAZAP2Q15038 168 aaPredicted RBP15.79■□□□□ 0.12
CLN3-206ENST00000360019 FAM189A2Q15884 450 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 RGS21Q2M5E4 152 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 FBXL14Q8N1E6 418 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 CHST4Q8NCG5 386 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 MRPS24Q96EL2 167 aaKnown RBP15.79■□□□□ 0.12
CLN3-206ENST00000360019 PLK3Q9H4B4 646 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 ZNF581Q9P0T4 197 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 RNF115Q9Y4L5 304 aa15.79■□□□□ 0.12
CLN3-206ENST00000360019 FAM208BQ5VWN6 2430 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 HRNRQ86YZ3 2850 aaPredicted RBP15.78■□□□□ 0.12
CLN3-206ENST00000360019 LINC00854A0A1B0GVQ3 168 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 C3orf80F5H4A9 247 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 TRAPPC2LH3BP13 241 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 GNB3P16520 340 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 GABRR1P24046 479 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 GUCA2AQ02747 115 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 TAF9Q16594 264 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 NKPD1Q17RQ9 610 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 PRAMEF6Q5VXH4 476 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 ELP2Q6IA86 826 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 C11orf53Q8IXP5 236 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 RAB3CQ96E17 227 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 TLNRD1Q9H1K6 362 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 KLK11Q9UBX7 282 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 KCNK7Q9Y2U2 307 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 TMEM235A6NFC5 223 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 PYCARD-AS1I3L0S3 204 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 GEMIN2O14893 280 aaKnown RBP15.78■□□□□ 0.12
CLN3-206ENST00000360019 CD200P41217 278 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 RBM11P57052 281 aaKnown RBP15.78■□□□□ 0.12
CLN3-206ENST00000360019 MPPED2Q15777 294 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 CDNFQ49AH0 187 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 SIGIRRQ6IA17 410 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 Q6ZTK2 550 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 POC5Q8NA72 575 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 C19orf18Q8NEA5 215 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 LILRB1Q8NHL6 650 aaPredicted RBP15.78■□□□□ 0.12
CLN3-206ENST00000360019 FCAMRQ8WWV6 532 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 PIK3IP1Q96FE7 263 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 ELMOD3Q96FG2 381 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 ARHGAP5-AS1Q96IT6 56 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 TMEM204Q9BSN7 226 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 PCDHB16Q9NRJ7 776 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 IL36RNQ9UBH0 155 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 ST3GAL6Q9Y274 331 aa15.78■□□□□ 0.12
CLN3-206ENST00000360019 RBMX2Q9Y388 322 aaKnown RBP15.78■□□□□ 0.12
CLN3-206ENST00000360019 PLA2G10O15496 165 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 SPRY3O43610 288 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 ORC5O43913 435 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 HIST1H1DP16402 221 aaKnown RBP15.77■□□□□ 0.11
CLN3-206ENST00000360019 BLVRBP30043 206 aaPredicted RBP15.77■□□□□ 0.11
CLN3-206ENST00000360019 KIR2DL3P43628 341 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 SRP9P49458 86 aaKnown RBP15.77■□□□□ 0.11
CLN3-206ENST00000360019 ZNF81P51508 661 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 FGF12P61328 243 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 SPRNQ5BIV9 151 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 POLDIP2Q9Y2S7 368 aa15.77■□□□□ 0.11
CLN3-206ENST00000360019 AKR7A2O43488 359 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms