RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NGFP01138 241 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 NAT1P18440 290 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 APLNRP35414 380 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 FUT6P51993 359 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 ATP1B3P54709 279 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 ZNF169Q14929 603 aaPredicted RBP16.06■□□□□ 0.16
HOXA9-201ENST00000343483 MICBQ29980 383 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 NHLRC3Q5JS37 347 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 SARAFQ96BY9 339 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 REPIN1Q9BWE0 567 aaKnown RBP16.06■□□□□ 0.16
HOXA9-201ENST00000343483 PECRQ9BY49 303 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 GPR160Q9UJ42 338 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 TRAV14DV4A0A0A6YYC5 116 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 C9orf170A2RU37 121 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 FOXI3A8MTJ6 420 aaPredicted RBP16.06■□□□□ 0.16
HOXA9-201ENST00000343483 IL2RAP01589 272 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 IL13RA1P78552 427 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 ACTBL2Q562R1 376 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 TFAP2EQ6VUC0 442 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 MDP1Q86V88 176 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 CNEP1R1Q8N9A8 125 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 ADAD2Q8NCV1 583 aaKnown RBP16.06■□□□□ 0.16
HOXA9-201ENST00000343483 Q96M66 194 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 TECTBQ96PL2 329 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 TAAR6Q96RI8 345 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 PDCD10Q9BUL8 212 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 MFFQ9GZY8 342 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 STARD10Q9Y365 291 aa16.06■□□□□ 0.16
HOXA9-201ENST00000343483 TUBAL3A6NHL2 446 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 CCSO14618 274 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 RPA2P15927 270 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 AKR1C4P17516 323 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 NKAPLQ5M9Q1 402 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 FAHD2BQ6P2I3 314 aaPredicted RBP16.05■□□□□ 0.16
HOXA9-201ENST00000343483 FAM214BQ7L5A3 538 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 DPPA2Q7Z7J5 298 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 HOGA1Q86XE5 327 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 ANGPTL6Q8NI99 470 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 ST8SIA4Q92187 359 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 FBXW5Q969U6 566 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 FAHD2AQ96GK7 314 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 OCSTAMPQ9BR26 566 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 FN3KRPQ9HA64 309 aa16.05■□□□□ 0.16
HOXA9-201ENST00000343483 SPENQ96T58 3664 aaKnown RBP16.05■□□□□ 0.16
HOXA9-201ENST00000343483 CD8AP01732 235 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 VAMP1P23763 118 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 CBX5P45973 191 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 FGL1Q08830 312 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 TOR2AQ5JU69 321 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 VAX1Q5SQQ9 334 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 GSG1LQ6UXU4 331 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 C6orf201Q7Z4U5 140 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 MARCH1Q8TCQ1 289 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 MITD1Q8WV92 249 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 PHB2Q99623 299 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 ST6GALNAC5Q9BVH7 336 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 OR51B6Q9H340 312 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 PLEKHJ1Q9NW61 149 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 RAXQ9Y2V3 346 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 OR5H14A6NHG9 310 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 SERPINE3A8MV23 424 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 AP2S1P53680 142 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-201ENST00000343483 SRSF4Q08170 494 aaKnown RBP16.04■□□□□ 0.16
HOXA9-201ENST00000343483 PDZK1IP1Q13113 114 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 TERB2Q8NHR7 220 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 CASTOR1Q8WTX7 329 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
HOXA9-201ENST00000343483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.04■□□□□ 0.16
HOXA9-201ENST00000343483 KIF25Q9UIL4 384 aa16.04■□□□□ 0.16
HOXA9-201ENST00000343483 IGKV1-12A0A0C4DH73 117 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 A0A1W2PR80 420 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 LYZL6O75951 148 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 IGKV1D-12P01611 117 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 AMY2BP19961 511 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 TGFBR3Q03167 851 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 TAF9Q16594 264 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 ARRDC1Q8N5I2 433 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 SLC30A7Q8NEW0 376 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 OR5H2Q8NGV7 314 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 SLX1AQ9BQ83 275 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 MYO7BQ6PIF6 2116 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 B3GALNT1O75752 331 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 SERPINA5P05154 406 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 RRASP10301 218 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 IGHV1-2P23083 117 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 WNT5AP41221 380 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 TAS2R31P59538 309 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 PRDX4Q13162 271 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 ALKAL2Q6UX46 152 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 ZNF546Q86UE3 836 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 C9orf106Q8NAJ2 232 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 BHLHE23Q8NDY6 225 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 SNIP1Q8TAD8 396 aaKnown RBP16.03■□□□□ 0.16
HOXA9-201ENST00000343483 MAFIPQ8WZ33 124 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 SEC22AQ96IW7 307 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 CRIM1Q9NZV1 1036 aa16.03■□□□□ 0.16
HOXA9-201ENST00000343483 FAM25EA8MYX2 175 aa16.02■□□□□ 0.15
HOXA9-201ENST00000343483 HLA-GP17693 338 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms